RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 FAM86B1E9PN63 330 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 CYP3A4P08684 503 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 FAM86B2P0C5J1 330 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 SETQ01105 290 aaPredicted RBP23.76■■□□□ 1.39
SMPD1-204ENST00000530395 GPM6BQ13491 265 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 BICD2Q8TD16 824 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 TRAPPC12Q8WVT3 735 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 ZBTB10Q96DT7 871 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 FTHL17Q9BXU8 183 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 TCEAL9Q9UHQ7 104 aa23.76■■□□□ 1.39
SMPD1-204ENST00000530395 IGKV6D-21A0A0A0MT36 114 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 H3BNC9 293 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 IPO5O00410 1097 aaKnown RBP23.75■■□□□ 1.39
SMPD1-204ENST00000530395 CCNE2O96020 404 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 TIGD5Q53EQ6 642 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 MIS18BP1Q6P0N0 1132 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 ABHD15Q6UXT9 468 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 CCDC148Q8NFR7 591 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 CRYGNQ8WXF5 182 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 PHKBQ93100 1093 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 ZNF577Q9BSK1 485 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 AGXT2Q9BYV1 514 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 RWDD3Q9Y3V2 267 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 ADGRA3Q8IWK6 1321 aa23.75■■□□□ 1.39
SMPD1-204ENST00000530395 IGLV3-22A0A075B6J6 115 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 SMIM35A0A1B0GVV1 85 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 ENPP3O14638 875 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 HBP1O60381 514 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 CD52P31358 61 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 TMEM62Q0P6H9 643 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 PKN1Q16512 942 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 MTHFD1LQ6UB35 978 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 NME8Q8N427 588 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 ATP8B4Q8TF62 1192 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 RNF26Q9BY78 433 aaPredicted RBP23.74■■□□□ 1.39
SMPD1-204ENST00000530395 UBE2ZQ9H832 354 aaPredicted RBP23.74■■□□□ 1.39
SMPD1-204ENST00000530395 ZNF302Q9NR11 478 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 TBC1D22BQ9NU19 505 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 COL1A2P08123 1366 aa23.74■■□□□ 1.39
SMPD1-204ENST00000530395 CTNNB1P35222 781 aa23.73■■□□□ 1.39
SMPD1-204ENST00000530395 PAK2Q13177 524 aa23.73■■□□□ 1.39
SMPD1-204ENST00000530395 PDXDC2PQ6P474 469 aa23.73■■□□□ 1.39
SMPD1-204ENST00000530395 CCDC60Q8IWA6 550 aaPredicted RBP23.73■■□□□ 1.39
SMPD1-204ENST00000530395 SLC26A6Q9BXS9 759 aa23.73■■□□□ 1.39
SMPD1-204ENST00000530395 CELF4Q9BZC1 486 aaKnown RBP23.73■■□□□ 1.39
SMPD1-204ENST00000530395 AGO3Q9H9G7 860 aaKnown RBP23.73■■□□□ 1.39
SMPD1-204ENST00000530395 EVPLQ92817 2033 aa23.72■■□□□ 1.39
SMPD1-204ENST00000530395 DHX15O43143 795 aaKnown RBP23.72■■□□□ 1.39
SMPD1-204ENST00000530395 EPB41L2O43491 1005 aaKnown RBP23.72■■□□□ 1.39
SMPD1-204ENST00000530395 IFNAR1P17181 557 aa23.72■■□□□ 1.39
SMPD1-204ENST00000530395 KRT76Q01546 638 aa23.72■■□□□ 1.39
SMPD1-204ENST00000530395 ZNF484Q5JVG2 852 aa23.72■■□□□ 1.39
SMPD1-204ENST00000530395 IGSF9BQ9UPX0 1349 aa23.72■■□□□ 1.39
SMPD1-204ENST00000530395 WDR81Q562E7 1941 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 KDM3AQ9Y4C1 1321 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 RB1P06400 928 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 KLRC1P26715 233 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 BTG3Q14201 252 aaPredicted RBP23.71■■□□□ 1.39
SMPD1-204ENST00000530395 NTRK3Q16288 839 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 ZNF746Q6NUN9 644 aaPredicted RBP23.71■■□□□ 1.39
SMPD1-204ENST00000530395 SWSAP1Q6NVH7 229 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 CKAP2LQ8IYA6 745 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 SMAP1Q8IYB5 467 aaPredicted RBP23.71■■□□□ 1.39
SMPD1-204ENST00000530395 BANK1Q8NDB2 785 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 C11orf84Q9BUA3 381 aaPredicted RBP23.71■■□□□ 1.39
SMPD1-204ENST00000530395 RC3H2Q9HBD1 1191 aaKnown RBP23.71■■□□□ 1.39
SMPD1-204ENST00000530395 PADI3Q9ULW8 664 aa23.71■■□□□ 1.39
SMPD1-204ENST00000530395 PDIA3P30101 505 aaKnown RBP23.7■■□□□ 1.38
SMPD1-204ENST00000530395 EVCP57679 992 aa23.7■■□□□ 1.38
SMPD1-204ENST00000530395 CCT2P78371 535 aaKnown RBP23.7■■□□□ 1.38
SMPD1-204ENST00000530395 PRR16Q569H4 304 aa23.7■■□□□ 1.38
SMPD1-204ENST00000530395 RUFY3Q7L099 469 aa23.7■■□□□ 1.38
SMPD1-204ENST00000530395 TRIM22Q8IYM9 498 aa23.7■■□□□ 1.38
SMPD1-204ENST00000530395 LINC01599Q8WXQ3 324 aa23.7■■□□□ 1.38
SMPD1-204ENST00000530395 UIMC1Q96RL1 719 aa23.7■■□□□ 1.38
SMPD1-204ENST00000530395 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.69■■□□□ 1.38
SMPD1-204ENST00000530395 C5orf67F2Z3F1 127 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 ADAMTS3O15072 1205 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 DGKIO75912 1065 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 PSAPP07602 524 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 STAG3L1P0CL83 205 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 KCNA5P22460 613 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 BMPR1AP36894 532 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 FAM43BQ6ZT52 329 aaPredicted RBP23.69■■□□□ 1.38
SMPD1-204ENST00000530395 NPAS4Q8IUM7 802 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 RASGRP4Q8TDF6 673 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 ZNF689Q96CS4 500 aaPredicted RBP23.69■■□□□ 1.38
SMPD1-204ENST00000530395 LMAN2LQ9H0V9 348 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 NSUN3Q9H649 340 aaKnown RBP23.69■■□□□ 1.38
SMPD1-204ENST00000530395 VPS54Q9P1Q0 977 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 CYP46A1Q9Y6A2 500 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 ATG2AQ2TAZ0 1938 aa23.69■■□□□ 1.38
SMPD1-204ENST00000530395 KIAA1671Q9BY89 1806 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 PPFIA3O75145 1194 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 CIITAP33076 1130 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 LEXMQ3ZCV2 418 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 ODR4Q5SWX8 454 aa23.68■■□□□ 1.38
SMPD1-204ENST00000530395 BBXQ8WY36 941 aaPredicted RBP23.68■■□□□ 1.38
SMPD1-204ENST00000530395 CLP1Q92989 425 aaKnown RBP23.68■■□□□ 1.38
SMPD1-204ENST00000530395 NCOA5Q9HCD5 579 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms