RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 PCDH12Q9NPG4 1184 aa8.81□□□□□ -1
SVIP-204ENST00000530199 MRPS23Q9Y3D9 190 aaKnown RBP8.81□□□□□ -1
SVIP-204ENST00000530199 PCDHB12Q9Y5F1 795 aa8.81□□□□□ -1
SVIP-204ENST00000530199 NUP98P52948 1817 aa8.81□□□□□ -1
SVIP-204ENST00000530199 ANKRD36CQ5JPF3 1778 aa8.81□□□□□ -1
SVIP-204ENST00000530199 MAP3K15Q6ZN16 1313 aa8.8□□□□□ -1
SVIP-204ENST00000530199 NCOR1O75376 2440 aa8.8□□□□□ -1
SVIP-204ENST00000530199 NOP56O00567 594 aaKnown RBP8.8□□□□□ -1
SVIP-204ENST00000530199 FGFR1P11362 822 aa8.8□□□□□ -1
SVIP-204ENST00000530199 GRIA2P42262 883 aa8.8□□□□□ -1
SVIP-204ENST00000530199 ZNF445P59923 1031 aa8.8□□□□□ -1
SVIP-204ENST00000530199 UBXN2AP68543 259 aa8.8□□□□□ -1
SVIP-204ENST00000530199 PRKG1Q13976 671 aa8.8□□□□□ -1
SVIP-204ENST00000530199 C21orf62-AS1Q17RA5 79 aa8.8□□□□□ -1
SVIP-204ENST00000530199 PPP1R42Q7Z4L9 355 aa8.8□□□□□ -1
SVIP-204ENST00000530199 ALYREFQ86V81 257 aaKnown RBP8.8□□□□□ -1
SVIP-204ENST00000530199 ARHGEF39Q8N4T4 335 aa8.8□□□□□ -1
SVIP-204ENST00000530199 CLMNQ96JQ2 1002 aa8.8□□□□□ -1
SVIP-204ENST00000530199 IPO9Q96P70 1041 aaKnown RBP8.8□□□□□ -1
SVIP-204ENST00000530199 SIN3AQ96ST3 1273 aa8.8□□□□□ -1
SVIP-204ENST00000530199 P2RX7Q99572 595 aaKnown RBP8.8□□□□□ -1
SVIP-204ENST00000530199 DUSP23Q9BVJ7 150 aa8.8□□□□□ -1
SVIP-204ENST00000530199 ARHGAP39Q9C0H5 1083 aa8.8□□□□□ -1
SVIP-204ENST00000530199 POLLQ9UGP5 575 aa8.8□□□□□ -1
SVIP-204ENST00000530199 SRRDQ9UH36 339 aa8.8□□□□□ -1
SVIP-204ENST00000530199 FBXL21Q9UKT6 434 aa8.8□□□□□ -1
SVIP-204ENST00000530199 ZMYND8Q9ULU4 1186 aaPredicted RBP8.8□□□□□ -1
SVIP-204ENST00000530199 TPX2Q9ULW0 747 aaKnown RBP8.8□□□□□ -1
SVIP-204ENST00000530199 EMC9Q9Y3B6 208 aa8.8□□□□□ -1
SVIP-204ENST00000530199 COL1A1P02452 1464 aaPredicted RBP8.8□□□□□ -1
SVIP-204ENST00000530199 BDP1A6H8Y1 2624 aa8.8□□□□□ -1
SVIP-204ENST00000530199 CEMIPQ8WUJ3 1361 aa8.79□□□□□ -1
SVIP-204ENST00000530199 TRBV23-1A0A0A0MS06 115 aa8.79□□□□□ -1
SVIP-204ENST00000530199 WNT10BO00744 389 aa8.79□□□□□ -1
SVIP-204ENST00000530199 TBX1O43435 398 aa8.79□□□□□ -1
SVIP-204ENST00000530199 KCNQ3O43525 872 aa8.79□□□□□ -1
SVIP-204ENST00000530199 TLR2O60603 784 aa8.79□□□□□ -1
SVIP-204ENST00000530199 RFPL3O75679 317 aa8.79□□□□□ -1
SVIP-204ENST00000530199 CYP7A1P22680 504 aa8.79□□□□□ -1
SVIP-204ENST00000530199 CBX2Q14781 532 aaPredicted RBP8.79□□□□□ -1
SVIP-204ENST00000530199 NFKBIBQ15653 356 aa8.79□□□□□ -1
SVIP-204ENST00000530199 PARP10Q53GL7 1025 aa8.79□□□□□ -1
SVIP-204ENST00000530199 NOL9Q5SY16 702 aaKnown RBP8.79□□□□□ -1
SVIP-204ENST00000530199 PAOXQ6QHF9 649 aa8.79□□□□□ -1
SVIP-204ENST00000530199 DDX46Q7L014 1031 aaKnown RBP8.79□□□□□ -1
SVIP-204ENST00000530199 ADCY4Q8NFM4 1077 aa8.79□□□□□ -1
SVIP-204ENST00000530199 NINJ1Q92982 152 aa8.79□□□□□ -1
SVIP-204ENST00000530199 PRDM14Q9GZV8 571 aa8.79□□□□□ -1
SVIP-204ENST00000530199 KCNF1Q9H3M0 494 aa8.79□□□□□ -1
SVIP-204ENST00000530199 NCOA5Q9HCD5 579 aaKnown RBP8.79□□□□□ -1
SVIP-204ENST00000530199 AKT3Q9Y243 479 aa8.79□□□□□ -1
SVIP-204ENST00000530199 RIPOR2Q9Y4F9 1068 aa8.79□□□□□ -1
SVIP-204ENST00000530199 FHOD1Q9Y613 1164 aa8.79□□□□□ -1
SVIP-204ENST00000530199 PSME4Q14997 1843 aa8.79□□□□□ -1
SVIP-204ENST00000530199 BTBD11A6QL63 1104 aa8.78□□□□□ -1
SVIP-204ENST00000530199 LRRN2O75325 713 aa8.78□□□□□ -1
SVIP-204ENST00000530199 LEFTY1O75610 366 aa8.78□□□□□ -1
SVIP-204ENST00000530199 PABPC1P11940 636 aaKnown RBP8.78□□□□□ -1
SVIP-204ENST00000530199 GPTP24298 496 aa8.78□□□□□ -1
SVIP-204ENST00000530199 HOXD10P28358 340 aa8.78□□□□□ -1
SVIP-204ENST00000530199 MMP14P50281 582 aa8.78□□□□□ -1
SVIP-204ENST00000530199 ANAPC15P60006 121 aa8.78□□□□□ -1
SVIP-204ENST00000530199 POMZP3Q6PJE2 187 aa8.78□□□□□ -1
SVIP-204ENST00000530199 BEND4Q6ZU67 534 aa8.78□□□□□ -1
SVIP-204ENST00000530199 NECAB2Q7Z6G3 386 aa8.78□□□□□ -1
SVIP-204ENST00000530199 APOBEC3FQ8IUX4 373 aaKnown RBP8.78□□□□□ -1
SVIP-204ENST00000530199 TRIM59Q8IWR1 403 aa8.78□□□□□ -1
SVIP-204ENST00000530199 SYTL5Q8TDW5 730 aaPredicted RBP8.78□□□□□ -1
SVIP-204ENST00000530199 PAWRQ96IZ0 340 aaKnown RBP8.78□□□□□ -1
SVIP-204ENST00000530199 COX4I2Q96KJ9 171 aa8.78□□□□□ -1
SVIP-204ENST00000530199 SEMA6BQ9H3T3 888 aa8.78□□□□□ -1
SVIP-204ENST00000530199 CGGBP1Q9UFW8 167 aaPredicted RBP8.78□□□□□ -1
SVIP-204ENST00000530199 ZSWIM8A7E2V4 1837 aa8.77□□□□□ -1
SVIP-204ENST00000530199 GNAT3A8MTJ3 354 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 RBAK-RBAKDNI3L0D1 243 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 PLD2O14939 933 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 PRODHO43272 600 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 PABPC4Q13310 644 aaKnown RBP eCLIP8.77□□□□□ -1.012e-6■■□□□ 14.4
SVIP-204ENST00000530199 SNW1Q13573 536 aaKnown RBP8.77□□□□□ -1.01
SVIP-204ENST00000530199 NSMFQ6X4W1 530 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 CRACR2BQ8N4Y2 399 aaPredicted RBP8.77□□□□□ -1.01
SVIP-204ENST00000530199 GIMAP7Q8NHV1 300 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 RAET1EQ8TD07 263 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 BRI3BPQ8WY22 251 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 BRF1Q92994 677 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 OSBP2Q969R2 916 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 ZCCHC17Q9NP64 241 aaKnown RBP8.77□□□□□ -1.01
SVIP-204ENST00000530199 PRR13Q9NZ81 148 aa8.77□□□□□ -1.01
SVIP-204ENST00000530199 DIS3Q9Y2L1 958 aaKnown RBP8.77□□□□□ -1.01
SVIP-204ENST00000530199 LAMB2P55268 1798 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 DHX15O43143 795 aaKnown RBP8.76□□□□□ -1.01
SVIP-204ENST00000530199 WDHD1O75717 1129 aaPredicted RBP8.76□□□□□ -1.01
SVIP-204ENST00000530199 FAM87AP0C7U9 286 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 SUMO1P63165 101 aaKnown RBP8.76□□□□□ -1.01
SVIP-204ENST00000530199 TM4SF20Q53R12 229 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 FAM214BQ7L5A3 538 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 CLEC10AQ8IUN9 316 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 TBC1D16Q8TBP0 767 aa8.76□□□□□ -1.01
SVIP-204ENST00000530199 ATXN2LQ8WWM7 1075 aaKnown RBP8.76□□□□□ -1.01
SVIP-204ENST00000530199 MYLIPQ8WY64 445 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms