RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.67□□□□□ -0.22
COPB1-206ENST00000529210 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 ARHGEF15O94989 841 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 AMHP03971 560 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 CTSHP09668 335 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 Q4G0T1 1027 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 PRR16Q569H4 304 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 FBXO47Q5MNV8 452 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 MIS18BP1Q6P0N0 1132 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 NME8Q8N427 588 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 USP38Q8NB14 1042 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 DNAJB3Q8WWF6 145 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 TOP1MTQ969P6 601 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 PHF20Q9BVI0 1012 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 SLKQ9H2G2 1235 aaPredicted RBP13.67□□□□□ -0.22
COPB1-206ENST00000529210 ZNF302Q9NR11 478 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 TRPC6Q9Y210 931 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 INSL6Q9Y581 213 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 PCDHA10Q9Y5I2 948 aa13.67□□□□□ -0.22
COPB1-206ENST00000529210 IGSF9BQ9UPX0 1349 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 CUL9Q8IWT3 2517 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 MSH4O15457 936 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 ABCB7O75027 752 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 ATP4AP20648 1035 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 AK2P54819 239 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 ERVK-21P61565 698 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
COPB1-206ENST00000529210 STK3Q13188 491 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 LPIN1Q14693 890 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 ZNF484Q5JVG2 852 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 IER5Q5VY09 327 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 B3GNT9Q6UX72 402 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.66□□□□□ -0.226e-8■■□□□ 11.4
COPB1-206ENST00000529210 TSHZ1Q6ZSZ6 1077 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 RDM1Q8NG50 284 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 BBXQ8WY36 941 aaPredicted RBP13.66□□□□□ -0.22
COPB1-206ENST00000529210 SLC5A5Q92911 643 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 LARP6Q9BRS8 491 aaKnown RBP13.66□□□□□ -0.22
COPB1-206ENST00000529210 LMCD1Q9NZU5 365 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 REV3LO60673 3130 aa13.66□□□□□ -0.22
COPB1-206ENST00000529210 TTC3P53804 2025 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 LINC01553A4QN01 128 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 EPOPA6NHQ4 379 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 WDR64B1ANS9 1081 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 DDX39AO00148 427 aaKnown RBP13.65□□□□□ -0.22
COPB1-206ENST00000529210 BACH1O14867 736 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 LPXNO60711 386 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 CTDNEP1O95476 244 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 PSAPP07602 524 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 XBP1P17861 261 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 SFNP31947 248 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 PDXDC2PQ6P474 469 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 TCEAL9Q9UHQ7 104 aa13.65□□□□□ -0.22
COPB1-206ENST00000529210 COL4A4P53420 1690 aaPredicted RBP13.65□□□□□ -0.22
COPB1-206ENST00000529210 PSMD10O75832 226 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 GHRP10912 638 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 KLRC1P26715 233 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 JAK3P52333 1124 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 IGBP1P78318 339 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 NONOQ15233 471 aaKnown RBP eCLIP13.64□□□□□ -0.23
COPB1-206ENST00000529210 KRT25Q7Z3Z0 450 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 TMCO2Q7Z6W1 182 aaPredicted RBP13.64□□□□□ -0.23
COPB1-206ENST00000529210 MYOCDQ8IZQ8 938 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 ZNF710Q8N1W2 664 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 WASF1Q92558 559 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 FAM167AQ96KS9 214 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 SAMD11Q96NU1 681 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 TGS1Q96RS0 853 aaKnown RBP13.64□□□□□ -0.23
COPB1-206ENST00000529210 FTHL17Q9BXU8 183 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 RC3H2Q9HBD1 1191 aaKnown RBP13.64□□□□□ -0.23
COPB1-206ENST00000529210 TRPV2Q9Y5S1 764 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 MTCH2Q9Y6C9 303 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 LOXHD1Q8IVV2 1947 aa13.64□□□□□ -0.23
COPB1-206ENST00000529210 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
COPB1-206ENST00000529210 EVPLQ92817 2033 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 M0QZ92 97 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 C22orf31O95567 290 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 IGFBP4P22692 258 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 ME3Q16798 604 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 PPP4R3AQ6IN85 833 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 KIAA0319LQ8IZA0 1049 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 CRIPAKQ8N1N5 446 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 LINC01465Q8N7H1 131 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 TEKT3Q9BXF9 490 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 CELF4Q9BZC1 486 aaKnown RBP13.63□□□□□ -0.23
COPB1-206ENST00000529210 AGO3Q9H9G7 860 aaKnown RBP13.63□□□□□ -0.23
COPB1-206ENST00000529210 DISC1Q9NRI5 854 aa13.63□□□□□ -0.23
COPB1-206ENST00000529210 CEP131Q9UPN4 1083 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms