RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 RASGEF1CQ8N431 466 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 FAM133AQ8N9E0 248 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 USP38Q8NB14 1042 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 CASKIN2Q8WXE0 1202 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 ZIM3Q96PE6 472 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 TRERF1Q96PN7 1200 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 CAPS2Q9BXY5 557 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 PACSIN1Q9BY11 444 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 FAM107BQ9H098 131 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 ISCUQ9H1K1 167 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 EPB41L5Q9HCM4 733 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 PI4KBQ9UBF8 816 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 ARMCX3Q9UH62 379 aaPredicted RBP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 ADAMTS1Q9UHI8 967 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 RSPH14Q9UHP6 348 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 VAV3Q9UKW4 847 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 DAAM1Q9Y4D1 1078 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 GRIN2DO15399 1336 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 SPATA31A6Q5VVP1 1343 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 A0A087WUV0 522 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 POTEFA5A3E0 1075 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 F8W031 263 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 MPHOSPH10O00566 681 aaKnown RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 EIF3DO15371 548 aaKnown RBP eCLIP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 AKAP3O75969 853 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 HEXIM1O94992 359 aaKnown RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 FTCDO95954 541 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 NR3C1P04150 777 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 KRT18P05783 430 aaKnown RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 POTEIP0CG38 1075 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 FERP16591 822 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 MUTP22033 750 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 CRKP46108 304 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 CASP5P51878 434 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 TNNC1P63316 161 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 CACNB1Q02641 598 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 EXOC3L4Q17RC7 722 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 CERKLQ49MI3 558 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 PRR16Q569H4 304 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 CFAP58Q5T655 872 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 LRIG3Q6UXM1 1119 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 KDM7AQ6ZMT4 941 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 TMEM179Q6ZVK1 233 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 SH3BP5LQ7L8J4 393 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 PODNQ7Z5L7 613 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 SFR1Q86XK3 245 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 SLC30A5Q8TAD4 765 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 OLIG1Q8TAK6 271 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 LMBR1Q8WVP7 490 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 TAF4BQ92750 862 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 KRT12Q99456 494 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 HSD17B14Q9BPX1 270 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 REEP2Q9BRK0 252 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 OLFML3Q9NRN5 406 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 SUCLA2Q9P2R7 463 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 NAGPAQ9UK23 515 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 TTC7AQ9ULT0 858 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-208ENST00000528865 ARFGEF1Q9Y6D6 1849 aa9.17□□□□□ -0.94
CSTF3-208ENST00000528865 ASTN1O14525 1302 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 UBE4BO95155 1302 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 ZNF233A6NK53 670 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 FAM86B1E9PN63 330 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 F5H6K3 240 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 CCDC188H7C350 402 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 MSH4O15457 936 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 RAD51CO43502 376 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 ZEB2O60315 1214 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 H2AFZP0C0S5 128 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 FAM86B2P0C5J1 330 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 FAM153BP0C7A2 387 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 ACTN1P12814 892 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 XRCC5P13010 732 aaKnown RBP9.16□□□□□ -0.94
CSTF3-208ENST00000528865 ALDH1B1P30837 517 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 EPS15P42566 896 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 SCNN1DP51172 638 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 MRPS25P82663 173 aaKnown RBP9.16□□□□□ -0.94
CSTF3-208ENST00000528865 GUCY2DQ02846 1103 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 KLRC3Q07444 240 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 CUL1Q13616 776 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 DOK7Q18PE1 504 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 FAM153CQ494X1 144 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 SYDE2Q5VT97 1194 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 ALKBH5Q6P6C2 394 aaKnown RBP9.16□□□□□ -0.94
CSTF3-208ENST00000528865 C1orf186Q6ZWK4 172 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 H2AFVQ71UI9 128 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 FBXO11Q86XK2 927 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 RBM46Q8TBY0 533 aaKnown RBP9.16□□□□□ -0.94
CSTF3-208ENST00000528865 SEC14L1Q92503 715 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 SLC35C1Q96A29 364 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 ZBTB9Q96C00 473 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 CCDC43Q96MW1 224 aaKnown RBP9.16□□□□□ -0.94
CSTF3-208ENST00000528865 PSMB7Q99436 277 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 HINFPQ9BQA5 517 aa9.16□□□□□ -0.94
CSTF3-208ENST00000528865 PAGR1Q9BTK6 254 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms