RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SCG2P13521 617 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 IL9P15248 144 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 KLRC1P26715 233 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 METAP2P50579 478 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 AP3B2Q13367 1082 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 PKN1Q16512 942 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 IER5Q5VY09 327 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 EP400NLQ6ZTU2 488 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 ZNF713Q8N859 430 aaPredicted RBP17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 ZNF689Q96CS4 500 aaPredicted RBP17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 CELF4Q9BZC1 486 aaKnown RBP17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 CDHR5Q9HBB8 845 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 PADI3Q9ULW8 664 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 TRPV2Q9Y5S1 764 aa17.69■□□□□ 0.42
CLNS1A-210ENST00000528364 IGLV3-22A0A075B6J6 115 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 BACH1O14867 736 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 DGKIO75912 1065 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 CSPG5O95196 566 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 HMGB1P09429 215 aaKnown RBP17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 ATP4AP20648 1035 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 IBSPP21815 317 aaPredicted RBP17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 BTG3Q14201 252 aaPredicted RBP17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 PTCRAQ6ISU1 281 aaPredicted RBP17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 SWSAP1Q6NVH7 229 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 CCDC60Q8IWA6 550 aaPredicted RBP17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 CRIPAKQ8N1N5 446 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 CRYGNQ8WXF5 182 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 TMX1Q9H3N1 280 aa17.68■□□□□ 0.42
CLNS1A-210ENST00000528364 EVPLQ92817 2033 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 SMIM35A0A1B0GVV1 85 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 CYP3A4P08684 503 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 HSPA4P34932 840 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 GATMP50440 423 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 RCAN1P53805 252 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 TIGD5Q53EQ6 642 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 NIPA1Q7RTP0 329 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 TRMT1LQ7Z2T5 733 aaKnown RBP17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 FAM178BQ8IXR5 827 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 KIAA0319LQ8IZA0 1049 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 NEK9Q8TD19 979 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 RASGRP4Q8TDF6 673 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 PHKBQ93100 1093 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 C1QTNF1Q9BXJ1 281 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 GLT8D2Q9H1C3 349 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 NSUN3Q9H649 340 aaKnown RBP17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 GINS2Q9Y248 185 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 ADGRA3Q8IWK6 1321 aa17.67■□□□□ 0.42
CLNS1A-210ENST00000528364 GRXCR2A6NFK2 248 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 C5orf67F2Z3F1 127 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 M0QZ92 97 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 HBP1O60381 514 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 RB1P06400 928 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 KRT76Q01546 638 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 BLOC1S2Q6QNY1 142 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 TEX2Q8IWB9 1127 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 ATP8B4Q8TF62 1192 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 TNPO1Q92973 898 aaKnown RBP17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 CLP1Q92989 425 aaKnown RBP17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 PPP1R16BQ96T49 567 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 LRFN3Q9BTN0 628 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 ZMYND12Q9H0C1 365 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 ALG13Q9NP73 1137 aaKnown RBP17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 ZNF302Q9NR11 478 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 MRPL42Q9Y6G3 142 aaKnown RBP17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 SQORQ9Y6N5 450 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 IGSF9BQ9UPX0 1349 aa17.66■□□□□ 0.42
CLNS1A-210ENST00000528364 COL4A6Q14031 1691 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 ZBTB42B2RXF5 422 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 IPO5O00410 1097 aaKnown RBP17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 EDIL3O43854 480 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 GTF2F1P35269 517 aaKnown RBP eCLIP17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 LTBRP36941 435 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 NFX1Q12986 1120 aaKnown RBP17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 PAK2Q13177 524 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 CAMK1Q14012 370 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 NTRK3Q16288 839 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 PAN2Q504Q3 1202 aaKnown RBP17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 FAM160B1Q5W0V3 765 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 PDXDC2PQ6P474 469 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 NME8Q8N427 588 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 PABPC5Q96DU9 382 aaKnown RBP17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 ZNF577Q9BSK1 485 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 C6orf50Q9HD87 102 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 CLDND1Q9NY35 253 aa17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 NOC2LQ9Y3T9 749 aaKnown RBP17.65■□□□□ 0.42
CLNS1A-210ENST00000528364 CCDC196A0A1B0GTZ2 297 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 ESYT2A0FGR8 921 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 FAM86C2PA6NEL3 165 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 MGEA5O60502 916 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 RPS6KB1P23443 525 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 DNAJB1P25685 340 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 SLC26A2P50443 739 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 CCT2P78371 535 aaKnown RBP17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 HYAL1Q12794 435 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 PRR16Q569H4 304 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 MIS18BP1Q6P0N0 1132 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 GJD3Q8N144 294 aa17.64■□□□□ 0.41
CLNS1A-210ENST00000528364 TMEM40Q8WWA1 233 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms