RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 C1QL4Q86Z23 238 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 STPG3Q8N7X2 389 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 SMC1BQ8NDV3 1235 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 ELF4Q99607 663 aaPredicted RBP8.15□□□□□ -1.1
PCF11-202ENST00000528336 SPC25Q9HBM1 224 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 ACSS2Q9NR19 701 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 NTMQ9P121 344 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 BTBD7Q9P203 1132 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 DNAJC6O75061 913 aa8.14□□□□□ -1.11
PCF11-202ENST00000528336 PTX3P26022 381 aaPredicted RBP8.14□□□□□ -1.11
PCF11-202ENST00000528336 SDHAP31040 664 aa8.14□□□□□ -1.11
PCF11-202ENST00000528336 IL13P35225 146 aa8.14□□□□□ -1.11
PCF11-202ENST00000528336 SARSP49591 514 aaKnown RBP8.14□□□□□ -1.11
PCF11-202ENST00000528336 KPNA1P52294 538 aaPredicted RBP8.14□□□□□ -1.11
PCF11-202ENST00000528336 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
PCF11-202ENST00000528336 FAM177A1Q8N128 213 aaPredicted RBP8.14□□□□□ -1.11
PCF11-202ENST00000528336 LINC01356Q8N9X3 169 aa8.14□□□□□ -1.11
PCF11-202ENST00000528336 TP53I13Q8NBR0 393 aaPredicted RBP8.14□□□□□ -1.11
PCF11-202ENST00000528336 USP7Q93009 1102 aa8.14□□□□□ -1.11
PCF11-202ENST00000528336 TACO1Q9BSH4 297 aaKnown RBP8.14□□□□□ -1.11
PCF11-202ENST00000528336 TOMM22Q9NS69 142 aa8.14□□□□□ -1.11
PCF11-202ENST00000528336 ZSCAN22P10073 491 aaPredicted RBP8.13□□□□□ -1.11
PCF11-202ENST00000528336 RPL13P26373 211 aaKnown RBP8.13□□□□□ -1.11
PCF11-202ENST00000528336 MLLT6P55198 1093 aaPredicted RBP8.13□□□□□ -1.11
PCF11-202ENST00000528336 CAP1Q01518 475 aa8.13□□□□□ -1.11
PCF11-202ENST00000528336 TRMT10BQ6PF06 316 aaKnown RBP8.13□□□□□ -1.11
PCF11-202ENST00000528336 INCENPQ9NQS7 918 aa8.13□□□□□ -1.11
PCF11-202ENST00000528336 SPTLC3Q9NUV7 552 aa8.13□□□□□ -1.11
PCF11-202ENST00000528336 SPO11Q9Y5K1 396 aa8.13□□□□□ -1.11
PCF11-202ENST00000528336 SH3D21A4FU49 640 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 GOLGA6L22H0YM25 854 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 FKBP9O95302 570 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 IL18BPO95998 194 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 CYP17A1P05093 508 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 VIL1P09327 827 aaKnown RBP8.12□□□□□ -1.11
PCF11-202ENST00000528336 ADCYAP1R1P41586 468 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 DHCR24Q15392 516 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 PRR31Q5SQ13 230 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 LRSAM1Q6UWE0 723 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 FKBP9P1Q75LS8 142 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 KRT26Q7Z3Y9 468 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 PASD1Q8IV76 773 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 CARFQ8N187 725 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 WRNIP1Q96S55 665 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 CHMP4AQ9BY43 222 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 GALNT8Q9NY28 637 aa8.12□□□□□ -1.11
PCF11-202ENST00000528336 CYP7B1O75881 506 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 MPIG6BO95866 241 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 ID4P47928 161 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 NFKB2Q00653 900 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 MCTP2Q6DN12 878 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 EFHBQ8N7U6 833 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 WDR48Q8TAF3 677 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 AMNQ9BXJ7 453 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 L2HGDHQ9H9P8 463 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 ASB1Q9Y576 335 aa8.11□□□□□ -1.11
PCF11-202ENST00000528336 NEMP1O14524 444 aa8.1□□□□□ -1.11
PCF11-202ENST00000528336 TGM5O43548 720 aa8.1□□□□□ -1.11
PCF11-202ENST00000528336 LSSP48449 732 aa8.1□□□□□ -1.11
PCF11-202ENST00000528336 SLURP1P55000 103 aa8.1□□□□□ -1.11
PCF11-202ENST00000528336 OCRLQ01968 901 aa8.1□□□□□ -1.11
PCF11-202ENST00000528336 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
PCF11-202ENST00000528336 C11orf74Q86VG3 221 aa8.1□□□□□ -1.11
PCF11-202ENST00000528336 TTC1Q99614 292 aa8.1□□□□□ -1.11
PCF11-202ENST00000528336 ECE1P42892 770 aa8.09□□□□□ -1.11
PCF11-202ENST00000528336 FNTBP49356 437 aa8.09□□□□□ -1.11
PCF11-202ENST00000528336 SMAD2Q15796 467 aaKnown RBP8.09□□□□□ -1.11
PCF11-202ENST00000528336 ATP13A4Q4VNC1 1196 aa8.09□□□□□ -1.11
PCF11-202ENST00000528336 ESRP1Q6NXG1 681 aaKnown RBP8.09□□□□□ -1.11
PCF11-202ENST00000528336 RTN4RL1Q86UN2 441 aaPredicted RBP8.09□□□□□ -1.11
PCF11-202ENST00000528336 ZCCHC14Q8WYQ9 949 aaKnown RBP8.09□□□□□ -1.11
PCF11-202ENST00000528336 FOXRED1Q96CU9 486 aaPredicted RBP8.09□□□□□ -1.11
PCF11-202ENST00000528336 C16orf92Q96LL3 132 aa8.09□□□□□ -1.11
PCF11-202ENST00000528336 FAM126AQ9BYI3 521 aaPredicted RBP8.09□□□□□ -1.11
PCF11-202ENST00000528336 TMX1Q9H3N1 280 aa8.09□□□□□ -1.11
PCF11-202ENST00000528336 IFT22Q9H7X7 185 aa8.09□□□□□ -1.11
PCF11-202ENST00000528336 KCND1Q9NSA2 647 aa8.09□□□□□ -1.11
PCF11-202ENST00000528336 ADAMTS20P59510 1910 aa8.09□□□□□ -1.11
PCF11-202ENST00000528336 KNG1P01042 644 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 CYP1A1P04798 512 aaPredicted RBP8.08□□□□□ -1.12
PCF11-202ENST00000528336 ZNF28P17035 718 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 BPIP17213 487 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 BMP7P18075 431 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 WDR72Q3MJ13 1102 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 DPP8Q6V1X1 898 aaPredicted RBP8.08□□□□□ -1.12
PCF11-202ENST00000528336 TXNDC5Q8NBS9 432 aaKnown RBP8.08□□□□□ -1.12
PCF11-202ENST00000528336 SYT8Q8NBV8 401 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 ADAMTS17Q8TE56 1095 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 RTF1Q92541 710 aaKnown RBP8.08□□□□□ -1.12
PCF11-202ENST00000528336 EMC7Q9NPA0 242 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 FTSJ1Q9UET6 329 aa8.08□□□□□ -1.12
PCF11-202ENST00000528336 H0Y858 1186 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 COL6A1P12109 1028 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 ADCY8P40145 1251 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 KCNC1P48547 511 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 IL13RA1P78552 427 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 SLC6A3Q01959 620 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 EPHA7Q15375 998 aa8.07□□□□□ -1.12
PCF11-202ENST00000528336 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms