RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 NAP1L4Q99733 375 aaKnown RBP13.7□□□□□ -0.22
TRAPPC4-209ENST00000528230 LLPHQ9BRT6 129 aaKnown RBP13.7□□□□□ -0.22
TRAPPC4-209ENST00000528230 TEKT3Q9BXF9 490 aa13.7□□□□□ -0.22
TRAPPC4-209ENST00000528230 BRMS1Q9HCU9 246 aa13.7□□□□□ -0.22
TRAPPC4-209ENST00000528230 LOXHD1Q8IVV2 1947 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 PSMD10O75832 226 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 TDP2O95551 362 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 CHRNA1P02708 482 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 KRT2P35908 639 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 JAK3P52333 1124 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 WDR5P61964 334 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 IGBP1P78318 339 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 LRCH2Q5VUJ6 765 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 NEK8Q86SG6 692 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 DBF4BQ8NFT6 615 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 DNAJB3Q8WWF6 145 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 SEPT8Q92599 483 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 APBB2Q92870 758 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 UIMC1Q96RL1 719 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 UPF2Q9HAU5 1272 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 DISC1Q9NRI5 854 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 DDX25Q9UHL0 483 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 YBX2Q9Y2T7 364 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 SAMM50Q9Y512 469 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 SQORQ9Y6N5 450 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 MYO9BQ13459 2157 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 SIP14410 1827 aa13.69□□□□□ -0.22
TRAPPC4-209ENST00000528230 SMIM35A0A1B0GVV1 85 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 CTSHP09668 335 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 ATP4AP20648 1035 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 KLRC1P26715 233 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 RABGGTBP53611 331 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 MGAT3Q09327 533 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 ST3GAL1Q11201 340 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 TRIM29Q14134 588 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 GRIN2CQ14957 1233 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 RABEP1Q15276 862 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 TCTN1Q2MV58 587 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 LETM2Q2VYF4 491 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 IER5Q5VY09 327 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 B3GNT9Q6UX72 402 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 FAM43BQ6ZT52 329 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 PIK3AP1Q6ZUJ8 805 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 ETNPPLQ8TBG4 499 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 OXER1Q8TDS5 423 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 FAM167AQ96KS9 214 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 FAM20AQ96MK3 541 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 NKX2-4Q9H2Z4 354 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 GABBR1Q9UBS5 961 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 CEP131Q9UPN4 1083 aa13.68□□□□□ -0.22
TRAPPC4-209ENST00000528230 IGSF9BQ9UPX0 1349 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 TBX3O15119 743 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 JAK2O60674 1132 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 DTNBO60941 627 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 MMP1P03956 469 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 MRPS6P82932 125 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 USP38Q8NB14 1042 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 TRAPPC12Q8WVT3 735 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 TNFRSF25Q93038 417 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 UNC45AQ9H3U1 944 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 NRBP2Q9NSY0 501 aa13.67□□□□□ -0.22
TRAPPC4-209ENST00000528230 KDM3AQ9Y4C1 1321 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 M0QZ92 97 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 MAGEB2O15479 319 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 AMHP03971 560 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 MYOGP15173 224 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 HMGN5P82970 282 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 KRT40Q6A162 431 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 MIER3Q7Z3K6 550 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 MYLIPQ8WY64 445 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 LAMA2P24043 3122 aaKnown RBP13.66□□□□□ -0.22
TRAPPC4-209ENST00000528230 BTBD18B2RXH4 712 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 SLC37A4O43826 429 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 TLL1O43897 1013 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 ST18O60284 1047 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 CCNT1O60563 726 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 GJB5O95377 273 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 DEFB103AP81534 67 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 NR5A1Q13285 461 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 PPP2R5CQ13362 524 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 LPIN1Q14693 890 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 EARS2Q5JPH6 523 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 FBXO47Q5MNV8 452 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 PPP2R2DQ66LE6 453 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 TSHZ1Q6ZSZ6 1077 aa13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 DIS3L2Q8IYB7 885 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-209ENST00000528230 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms