RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 TRAPPC12Q8WVT3 735 aa19.63■□□□□ 0.73
ATM-213ENST00000527891 FAM122AQ96E09 287 aa19.63■□□□□ 0.73
ATM-213ENST00000527891 C11orf16Q9NQ32 467 aa19.63■□□□□ 0.73
ATM-213ENST00000527891 CLDND1Q9NY35 253 aa19.63■□□□□ 0.73
ATM-213ENST00000527891 FAM50BQ9Y247 325 aa19.63■□□□□ 0.73
ATM-213ENST00000527891 IGSF9BQ9UPX0 1349 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 KLF18A0A0U1RQI7 1052 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 SMIM35A0A1B0GVV1 85 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 POTEB3A0JP26 581 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 MEIS1O00470 390 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 ATG7O95352 703 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 ZNF76P36508 570 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 CLK2P49760 499 aaKnown RBP19.62■□□□□ 0.73
ATM-213ENST00000527891 RCAN1P53805 252 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 PAK2Q13177 524 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 KRT32Q14532 448 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 ADCK5Q3MIX3 580 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 POTEBQ6S5H4 581 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 RASEFQ8IZ41 740 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 PLVAPQ9BX97 442 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 CELF4Q9BZC1 486 aaKnown RBP19.62■□□□□ 0.73
ATM-213ENST00000527891 TMEM260Q9NX78 707 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 PADI3Q9ULW8 664 aa19.62■□□□□ 0.73
ATM-213ENST00000527891 KDM3AQ9Y4C1 1321 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 FAM86C2PA6NEL3 165 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 MMP1P03956 469 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 CDC27P30260 824 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 MTHFD1LQ6UB35 978 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 NIPA1Q7RTP0 329 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 RTN4RL1Q86UN2 441 aaPredicted RBP19.61■□□□□ 0.73
ATM-213ENST00000527891 SKAP1Q86WV1 359 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 NPAS4Q8IUM7 802 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 CMTR2Q8IYT2 770 aaKnown RBP19.61■□□□□ 0.73
ATM-213ENST00000527891 CRIPAKQ8N1N5 446 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 NME8Q8N427 588 aa19.61■□□□□ 0.73
ATM-213ENST00000527891 FAM217BQ9NTX9 383 aaPredicted RBP19.61■□□□□ 0.73
ATM-213ENST00000527891 ARIH1Q9Y4X5 557 aaPredicted RBP19.61■□□□□ 0.73
ATM-213ENST00000527891 TTC3P53804 2025 aa19.6■□□□□ 0.73
ATM-213ENST00000527891 IGKV6D-21A0A0A0MT36 114 aa19.6■□□□□ 0.73
ATM-213ENST00000527891 DDX39AO00148 427 aaKnown RBP19.6■□□□□ 0.73
ATM-213ENST00000527891 HMGB1P09429 215 aaKnown RBP19.6■□□□□ 0.73
ATM-213ENST00000527891 STAG3L1P0CL83 205 aa19.6■□□□□ 0.73
ATM-213ENST00000527891 KRT76Q01546 638 aa19.6■□□□□ 0.73
ATM-213ENST00000527891 CTC1Q2NKJ3 1217 aa19.6■□□□□ 0.73
ATM-213ENST00000527891 FAM160B1Q5W0V3 765 aa19.6■□□□□ 0.73
ATM-213ENST00000527891 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
ATM-213ENST00000527891 MRPL42Q9Y6G3 142 aaKnown RBP19.6■□□□□ 0.73
ATM-213ENST00000527891 FAM86B1E9PN63 330 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 BACH1O14867 736 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 HBP1O60381 514 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 CCNE2O96020 404 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 FAM86B2P0C5J1 330 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 SCG2P13521 617 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 LTBRP36941 435 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 HYAL1Q12794 435 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 ABHD15Q6UXT9 468 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 PLA2G4DQ86XP0 818 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 ATP8B4Q8TF62 1192 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 P2RX5Q93086 422 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 PRKAG3Q9UGI9 489 aa19.59■□□□□ 0.73
ATM-213ENST00000527891 NAP1L2Q9ULW6 460 aaPredicted RBP19.59■□□□□ 0.73
ATM-213ENST00000527891 CDC45O75419 566 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 CSPG5O95196 566 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 ALADP13716 330 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 KLRC1P26715 233 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 METAP2P50579 478 aaKnown RBP eCLIP19.58■□□□□ 0.72
ATM-213ENST00000527891 FGD1P98174 961 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 PFKFB3Q16875 520 aaPredicted RBP19.58■□□□□ 0.72
ATM-213ENST00000527891 PAN2Q504Q3 1202 aaKnown RBP19.58■□□□□ 0.72
ATM-213ENST00000527891 NAALADL2Q58DX5 795 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 JAKMIP3Q5VZ66 844 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 CCDC60Q8IWA6 550 aaPredicted RBP19.58■□□□□ 0.72
ATM-213ENST00000527891 ALG13Q9NP73 1137 aaKnown RBP19.58■□□□□ 0.72
ATM-213ENST00000527891 ZNF302Q9NR11 478 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 PLAGL2Q9UPG8 496 aa19.58■□□□□ 0.72
ATM-213ENST00000527891 COL1A2P08123 1366 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 IGLV3-22A0A075B6J6 115 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 CCDC196A0A1B0GTZ2 297 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 CYP3A4P08684 503 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 ADD1P35611 737 aaKnown RBP19.57■□□□□ 0.72
ATM-213ENST00000527891 ZP2Q05996 745 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 NFX1Q12986 1120 aaKnown RBP19.57■□□□□ 0.72
ATM-213ENST00000527891 TMEM266Q2M3C6 531 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 MIS18BP1Q6P0N0 1132 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 PDXDC2PQ6P474 469 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 FAM43BQ6ZT52 329 aaPredicted RBP19.57■□□□□ 0.72
ATM-213ENST00000527891 CRYGNQ8WXF5 182 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 TMX1Q9H3N1 280 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 LRFN2Q9ULH4 789 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 GINS2Q9Y248 185 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 ATG2AQ2TAZ0 1938 aa19.57■□□□□ 0.72
ATM-213ENST00000527891 ESYT2A0FGR8 921 aa19.56■□□□□ 0.72
ATM-213ENST00000527891 PRR33A8MZF0 331 aa19.56■□□□□ 0.72
ATM-213ENST00000527891 IPO5O00410 1097 aaKnown RBP19.56■□□□□ 0.72
ATM-213ENST00000527891 DHX15O43143 795 aaKnown RBP19.56■□□□□ 0.72
ATM-213ENST00000527891 SETQ01105 290 aaPredicted RBP19.56■□□□□ 0.72
ATM-213ENST00000527891 DLX2Q07687 328 aaPredicted RBP19.56■□□□□ 0.72
ATM-213ENST00000527891 CAMK1Q14012 370 aa19.56■□□□□ 0.72
ATM-213ENST00000527891 ZNF484Q5JVG2 852 aa19.56■□□□□ 0.72
ATM-213ENST00000527891 MCTP2Q6DN12 878 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms