RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 MBLAC1A4D2B0 266 aaPredicted RBP21.86■■□□□ 1.09
CAPN1-211ENST00000527739 DHX15O43143 795 aaKnown RBP21.86■■□□□ 1.09
CAPN1-211ENST00000527739 APBB2Q92870 758 aa21.86■■□□□ 1.09
CAPN1-211ENST00000527739 SAMM50Q9Y512 469 aa21.86■■□□□ 1.09
CAPN1-211ENST00000527739 CDY2AQ9Y6F7 541 aa21.86■■□□□ 1.09
CAPN1-211ENST00000527739 TCF20Q9UGU0 1960 aaKnown RBP21.86■■□□□ 1.09
CAPN1-211ENST00000527739 M0QZ92 97 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 CDKL5O76039 1030 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 BMP1P13497 986 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 SLC26A2P50443 739 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 KCNQ1P51787 676 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 TMEM62Q0P6H9 643 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 SKIV2LQ15477 1246 aaKnown RBP21.85■■□□□ 1.09
CAPN1-211ENST00000527739 RPAINQ86UA6 219 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 AIFM3Q96NN9 605 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 PCDHA4Q9UN74 947 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 INSL6Q9Y581 213 aa21.85■■□□□ 1.09
CAPN1-211ENST00000527739 PRRC2BQ5JSZ5 2229 aaKnown RBP21.85■■□□□ 1.09
CAPN1-211ENST00000527739 CIITAP33076 1130 aa21.84■■□□□ 1.09
CAPN1-211ENST00000527739 MRPS6P82932 125 aaKnown RBP21.84■■□□□ 1.09
CAPN1-211ENST00000527739 SCRN1Q12765 414 aa21.84■■□□□ 1.09
CAPN1-211ENST00000527739 LPIN1Q14693 890 aa21.84■■□□□ 1.09
CAPN1-211ENST00000527739 IER5Q5VY09 327 aa21.84■■□□□ 1.09
CAPN1-211ENST00000527739 CCDC60Q8IWA6 550 aaPredicted RBP21.84■■□□□ 1.09
CAPN1-211ENST00000527739 BLIDQ8IZY5 108 aa21.84■■□□□ 1.09
CAPN1-211ENST00000527739 TBCKQ8TEA7 893 aa21.84■■□□□ 1.09
CAPN1-211ENST00000527739 YME1L1Q96TA2 773 aa21.84■■□□□ 1.09
CAPN1-211ENST00000527739 TSPYL2Q9H2G4 693 aaPredicted RBP21.84■■□□□ 1.09
CAPN1-211ENST00000527739 PCDHA2Q9Y5H9 948 aa21.84■■□□□ 1.09
CAPN1-211ENST00000527739 IGKV6D-21A0A0A0MT36 114 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 HBP1O60381 514 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 DTNBO60941 627 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 PSAPP07602 524 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 POU3F3P20264 500 aaPredicted RBP21.83■■□□□ 1.09
CAPN1-211ENST00000527739 KLRC1P26715 233 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 USP11P51784 963 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 ANAPC15P60006 121 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 KRT76Q01546 638 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 MGAT3Q09327 533 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 ANKRD1Q15327 319 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 ZNF746Q6NUN9 644 aaPredicted RBP21.83■■□□□ 1.09
CAPN1-211ENST00000527739 MTHFD1LQ6UB35 978 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 IL27Q8NEV9 243 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 ATP8B4Q8TF62 1192 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 TGS1Q96RS0 853 aaKnown RBP21.83■■□□□ 1.09
CAPN1-211ENST00000527739 C22orf23Q9BZE7 217 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 TPCN1Q9ULQ1 816 aa21.83■■□□□ 1.09
CAPN1-211ENST00000527739 BDP1A6H8Y1 2624 aa21.83■■□□□ 1.08
CAPN1-211ENST00000527739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.82■■□□□ 1.08
CAPN1-211ENST00000527739 LINC01553A4QN01 128 aa21.82■■□□□ 1.08
CAPN1-211ENST00000527739 RPLP2P05387 115 aaKnown RBP21.82■■□□□ 1.08
CAPN1-211ENST00000527739 GRB10Q13322 594 aa21.82■■□□□ 1.08
CAPN1-211ENST00000527739 FBXO47Q5MNV8 452 aa21.82■■□□□ 1.08
CAPN1-211ENST00000527739 SMAP1Q8IYB5 467 aaPredicted RBP21.82■■□□□ 1.08
CAPN1-211ENST00000527739 TOP1MTQ969P6 601 aa21.82■■□□□ 1.08
CAPN1-211ENST00000527739 GABBR1Q9UBS5 961 aa21.82■■□□□ 1.08
CAPN1-211ENST00000527739 KCNJ14Q9UNX9 436 aa21.82■■□□□ 1.08
CAPN1-211ENST00000527739 GINS2Q9Y248 185 aa21.82■■□□□ 1.08
CAPN1-211ENST00000527739 PCDHA10Q9Y5I2 948 aa21.82■■□□□ 1.08
CAPN1-211ENST00000527739 MSH4O15457 936 aa21.81■■□□□ 1.08
CAPN1-211ENST00000527739 CHMP2AO43633 222 aa21.81■■□□□ 1.08
CAPN1-211ENST00000527739 EIF5BO60841 1220 aaKnown RBP21.81■■□□□ 1.08
CAPN1-211ENST00000527739 AK2P54819 239 aa21.81■■□□□ 1.08
CAPN1-211ENST00000527739 ZNF484Q5JVG2 852 aa21.81■■□□□ 1.08
CAPN1-211ENST00000527739 GDPD5Q8WTR4 605 aa21.81■■□□□ 1.08
CAPN1-211ENST00000527739 TRPV2Q9Y5S1 764 aa21.81■■□□□ 1.08
CAPN1-211ENST00000527739 COL4A4P53420 1690 aaPredicted RBP21.8■■□□□ 1.08
CAPN1-211ENST00000527739 SMIM35A0A1B0GVV1 85 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 LPXNO60711 386 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 PFKFB2O60825 505 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 GAS7O60861 476 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 XBP1P17861 261 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 CD52P31358 61 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 MKRN4PQ13434 485 aaPredicted RBP21.8■■□□□ 1.08
CAPN1-211ENST00000527739 TSHZ1Q6ZSZ6 1077 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 GJA10Q969M2 543 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 LENG9Q96B70 501 aa21.8■■□□□ 1.08
CAPN1-211ENST00000527739 CELF4Q9BZC1 486 aaKnown RBP21.8■■□□□ 1.08
CAPN1-211ENST00000527739 WDR64B1ANS9 1081 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 ENPP3O14638 875 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 ATP4AP20648 1035 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 ERVK-21P61565 698 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 HTRA4P83105 476 aaPredicted RBP21.79■■□□□ 1.08
CAPN1-211ENST00000527739 NONOQ15233 471 aaKnown RBP eCLIP21.79■■□□□ 1.08
CAPN1-211ENST00000527739 LRCH2Q5VUJ6 765 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 GALNT17Q6IS24 598 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 NME8Q8N427 588 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 C17orf80Q9BSJ5 609 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 TEKT3Q9BXF9 490 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 AGO3Q9H9G7 860 aaKnown RBP21.79■■□□□ 1.08
CAPN1-211ENST00000527739 DISC1Q9NRI5 854 aa21.79■■□□□ 1.08
CAPN1-211ENST00000527739 MAFBQ9Y5Q3 323 aaPredicted RBP21.79■■□□□ 1.08
CAPN1-211ENST00000527739 NCOR1O75376 2440 aa21.78■■□□□ 1.08
CAPN1-211ENST00000527739 EDIL3O43854 480 aa21.78■■□□□ 1.08
CAPN1-211ENST00000527739 TDP2O95551 362 aa21.78■■□□□ 1.08
CAPN1-211ENST00000527739 IBSPP21815 317 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-211ENST00000527739 INF2Q27J81 1249 aa21.78■■□□□ 1.08
CAPN1-211ENST00000527739 KRT25Q7Z3Z0 450 aa21.78■■□□□ 1.08
CAPN1-211ENST00000527739 METTL13Q8N6R0 699 aa21.78■■□□□ 1.08
CAPN1-211ENST00000527739 NECAB1Q8N987 351 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms