RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 PLPPR4Q7Z2D5 763 aa18.43■□□□□ 0.54
PTPRU-210ENST00000527027 RNF135Q8IUD6 432 aa18.43■□□□□ 0.54
PTPRU-210ENST00000527027 KLHL23Q8NBE8 558 aa18.43■□□□□ 0.54
PTPRU-210ENST00000527027 MSLNLQ96KJ4 702 aa18.43■□□□□ 0.54
PTPRU-210ENST00000527027 MFSD14AQ96MC6 490 aa18.43■□□□□ 0.54
PTPRU-210ENST00000527027 MXRA8Q9BRK3 442 aa18.43■□□□□ 0.54
PTPRU-210ENST00000527027 CELF4Q9BZC1 486 aaKnown RBP18.43■□□□□ 0.54
PTPRU-210ENST00000527027 MUTYHQ9UIF7 546 aa18.43■□□□□ 0.54
PTPRU-210ENST00000527027 TRPC6Q9Y210 931 aa18.43■□□□□ 0.54
PTPRU-210ENST00000527027 EYA4O95677 639 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 SCG2P13521 617 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 NDUFV1P49821 464 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 STAT5BP51692 787 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 ACTR2P61160 394 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 NHLH1Q02575 133 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 PAK2Q13177 524 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 PLCB4Q15147 1175 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 NME8Q8N427 588 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 EFHBQ8N7U6 833 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 FANCBQ8NB91 859 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 SLC12A7Q9Y666 1083 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 IGSF9BQ9UPX0 1349 aa18.42■□□□□ 0.54
PTPRU-210ENST00000527027 SMIM35A0A1B0GVV1 85 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 MRE11P49959 708 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 COL9A3Q14050 684 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-210ENST00000527027 PAN2Q504Q3 1202 aaKnown RBP18.41■□□□□ 0.54
PTPRU-210ENST00000527027 FAM43BQ6ZT52 329 aaPredicted RBP18.41■□□□□ 0.54
PTPRU-210ENST00000527027 TMTC3Q6ZXV5 915 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 HEATR3Q7Z4Q2 680 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 CYP2W1Q8TAV3 490 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 TRAPPC12Q8WVT3 735 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 POF1BQ8WVV4 589 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
PTPRU-210ENST00000527027 SDF4Q9BRK5 362 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 CLEC1BQ9P126 229 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 KDM3AQ9Y4C1 1321 aa18.41■□□□□ 0.54
PTPRU-210ENST00000527027 KRT76Q01546 638 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 MTHFD1LQ6UB35 978 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 ADGRD2Q7Z7M1 963 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 RAB11FIP4Q86YS3 637 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 TEX2Q8IWB9 1127 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 EDAQ92838 391 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 TMX1Q9H3N1 280 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 LRFN2Q9ULH4 789 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 NFASCO94856 1347 aa18.4■□□□□ 0.54
PTPRU-210ENST00000527027 SLC27A2O14975 620 aa18.39■□□□□ 0.53
PTPRU-210ENST00000527027 ATG7O95352 703 aa18.39■□□□□ 0.53
PTPRU-210ENST00000527027 ARP10275 920 aa18.39■□□□□ 0.53
PTPRU-210ENST00000527027 NRIP1P48552 1158 aa18.39■□□□□ 0.53
PTPRU-210ENST00000527027 SLC26A2P50443 739 aa18.39■□□□□ 0.53
PTPRU-210ENST00000527027 COASYQ13057 564 aa18.39■□□□□ 0.53
PTPRU-210ENST00000527027 CEP55Q53EZ4 464 aa18.39■□□□□ 0.53
PTPRU-210ENST00000527027 SMRP1Q8NCR6 262 aa18.39■□□□□ 0.53
PTPRU-210ENST00000527027 LSG1Q9H089 658 aaKnown RBP18.39■□□□□ 0.53
PTPRU-210ENST00000527027 FOSP01100 380 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-210ENST00000527027 KLRC1P26715 233 aa18.38■□□□□ 0.53
PTPRU-210ENST00000527027 SARSP49591 514 aaKnown RBP18.38■□□□□ 0.53
PTPRU-210ENST00000527027 GATMP50440 423 aa18.38■□□□□ 0.53
PTPRU-210ENST00000527027 NFX1Q12986 1120 aaKnown RBP18.38■□□□□ 0.53
PTPRU-210ENST00000527027 ITGB3BPQ13352 177 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-210ENST00000527027 TMEM266Q2M3C6 531 aa18.38■□□□□ 0.53
PTPRU-210ENST00000527027 BMP8AQ7Z5Y6 402 aa18.38■□□□□ 0.53
PTPRU-210ENST00000527027 RBM23Q86U06 439 aaKnown RBP18.38■□□□□ 0.53
PTPRU-210ENST00000527027 SGMS1Q86VZ5 419 aa18.38■□□□□ 0.53
PTPRU-210ENST00000527027 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
PTPRU-210ENST00000527027 AGO4Q9HCK5 861 aaKnown RBP18.38■□□□□ 0.53
PTPRU-210ENST00000527027 RIC8AQ9NPQ8 531 aa18.38■□□□□ 0.53
PTPRU-210ENST00000527027 PCDHB7Q9Y5E2 793 aa18.38■□□□□ 0.53
PTPRU-210ENST00000527027 IGKV6D-21A0A0A0MT36 114 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 MEIS1O00470 390 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 PPFIA3O75145 1194 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 NAPAP54920 295 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 SYNE3Q6ZMZ3 975 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 MICAL1Q8TDZ2 1067 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 TLE6Q9H808 572 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 ERVK-5Q9HDB9 667 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 AAASQ9NRG9 546 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
PTPRU-210ENST00000527027 PCDHB12Q9Y5F1 795 aa18.37■□□□□ 0.53
PTPRU-210ENST00000527027 LOC730098B7Z3J9 87 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 HBP1O60381 514 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 RPS6KA5O75582 802 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 GLP2RO95838 553 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 IBSPP21815 317 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-210ENST00000527027 UBE3AQ05086 875 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 CBX2Q14781 532 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-210ENST00000527027 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 ATG2AQ2TAZ0 1938 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 ODR4Q5SWX8 454 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 CREB3L3Q68CJ9 461 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 TYW1BQ6NUM6 668 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 TRIM67Q6ZTA4 783 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 MICU3Q86XE3 530 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 KIAA0319LQ8IZA0 1049 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 PGBD1Q96JS3 809 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 ANO3Q9BYT9 981 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 CDHR5Q9HBB8 845 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 BARX2Q9UMQ3 279 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-210ENST00000527027 GINS2Q9Y248 185 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms