RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 SYT2Q8N9I0 419 aaPredicted RBP12.77□□□□□ -0.36
LINC01001-201ENST00000526704 LRRC57Q8N9N7 239 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 GOLPH3Q9H4A6 298 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 NENFQ9UMX5 172 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 ASTN1O14525 1302 aa12.77□□□□□ -0.36
LINC01001-201ENST00000526704 RAD21O60216 631 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 KIF4AO95239 1232 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 ZBTB48P10074 688 aaPredicted RBP12.77□□□□□ -0.37
LINC01001-201ENST00000526704 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
LINC01001-201ENST00000526704 EPHA7Q15375 998 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 Q4G0T1 1027 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 C10orf76Q5T2E6 689 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 CFAP58Q5T655 872 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 DNAAF5Q86Y56 855 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 RABEP2Q9H5N1 569 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 SIX2Q9NPC8 291 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 USP21Q9UK80 565 aa12.77□□□□□ -0.37
LINC01001-201ENST00000526704 RSPH10B2B2RC85 870 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 KCNK3O14649 394 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 AKAP3O75969 853 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 RSPH10BP0C881 870 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 RPA1P27694 616 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 TNNC1P63316 161 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 RPS6KA1Q15418 735 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 SLFN13Q68D06 897 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 KCTD16Q68DU8 428 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 HHIPL2Q6UWX4 724 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 CD302Q8IX05 232 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 BCAS4Q8TDM0 211 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 TAF4BQ92750 862 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 MKL1Q969V6 931 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 CCDC17Q96LX7 622 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 SPAG5Q96R06 1193 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 NAGPAQ9UK23 515 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 FAM86B1E9PN63 330 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 PDXKO00764 312 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 TBX3O15119 743 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 FAM86B2P0C5J1 330 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 PRKCIP41743 596 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 JAM2P57087 298 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 SNAP25P60880 206 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 PDCLQ13371 301 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 BMT2Q1RMZ1 405 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 DCAF17Q5H9S7 520 aaPredicted RBP12.76□□□□□ -0.37
LINC01001-201ENST00000526704 KLHL7Q8IXQ5 586 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 EFCAB13Q8IY85 973 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 ERMNQ8TAM6 284 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 WHAMMQ8TF30 809 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 BCAS3Q9H6U6 928 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 DNM3Q9UQ16 869 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 BZW2Q9Y6E2 419 aaKnown RBP12.76□□□□□ -0.37
LINC01001-201ENST00000526704 LOXHD1Q8IVV2 1947 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 CALUO43852 315 aaPredicted RBP12.76□□□□□ -0.37
LINC01001-201ENST00000526704 XRCC5P13010 732 aaKnown RBP12.76□□□□□ -0.37
LINC01001-201ENST00000526704 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
LINC01001-201ENST00000526704 ECHS1P30084 290 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 KDM7AQ6ZMT4 941 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 PACS2Q86VP3 889 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 RUSC1Q9BVN2 902 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 NYAP2Q9P242 653 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 VAV3Q9UKW4 847 aa12.76□□□□□ -0.37
LINC01001-201ENST00000526704 ATP8B3O60423 1300 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 SLC16A3O15427 465 aaKnown RBP12.75□□□□□ -0.37
LINC01001-201ENST00000526704 NR3C1P04150 777 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 SREBF1P36956 1147 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 HSPA9P38646 679 aaKnown RBP12.75□□□□□ -0.37
LINC01001-201ENST00000526704 CASP4P49662 377 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 PTPROQ16827 1216 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 ALKBH5Q6P6C2 394 aaKnown RBP12.75□□□□□ -0.37
LINC01001-201ENST00000526704 SIAH1Q8IUQ4 282 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 TPCN2Q8NHX9 752 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 SCFD2Q8WU76 684 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 PPM1EQ8WY54 764 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 SLC35C1Q96A29 364 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 TYW1Q9NV66 732 aaKnown RBP12.75□□□□□ -0.37
LINC01001-201ENST00000526704 PCDHAC2Q9Y5I4 1007 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 ZMYM2Q9UBW7 1377 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
LINC01001-201ENST00000526704 ATP1A2P50993 1020 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 CACNB3P54284 484 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 ACTRT1Q8TDG2 376 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 PBKQ96KB5 322 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 ZC3H12CQ9C0D7 883 aaKnown RBP12.75□□□□□ -0.37
LINC01001-201ENST00000526704 ISCUQ9H1K1 167 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 TAF1DQ9H5J8 278 aaPredicted RBP12.75□□□□□ -0.37
LINC01001-201ENST00000526704 GCNT4Q9P109 453 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
LINC01001-201ENST00000526704 DDTLA6NHG4 134 aaPredicted RBP12.74□□□□□ -0.37
LINC01001-201ENST00000526704 EBAG9O00559 213 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 MSH4O15457 936 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 CPP00450 1065 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 NOP2P46087 812 aaKnown RBP12.74□□□□□ -0.37
LINC01001-201ENST00000526704 CRKP46108 304 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 CYP4A11Q02928 519 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms