RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 PPARGP37231 505 aaPredicted RBP15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 TXNRD1Q16881 649 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 EPHA10Q5JZY3 1008 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 RHOT2Q8IXI1 618 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 WDR19Q8NEZ3 1342 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 STK36Q9NRP7 1315 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 CYP2D6P10635 497 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 SNAP25P60880 206 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 DYNLT1P63172 113 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 SCARA5Q6ZMJ2 495 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 SIRT2Q8IXJ6 389 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 RRAGDQ9NQL2 400 aaPredicted RBP15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 SAMSN1Q9NSI8 373 aaKnown RBP15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 INTS9Q9NV88 658 aaKnown RBP15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 TTC36A6NLP5 189 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 HIP1RO75146 1068 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 EPHB4P54760 987 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 C11orf57Q6ZUT1 292 aaPredicted RBP15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 CEP120Q8N960 986 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 PLTPP55058 493 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 ALKBH5Q6P6C2 394 aaKnown RBP15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 XXYLT1Q8NBI6 393 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 HERC5Q9UII4 1024 aaKnown RBP15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 MID2Q9UJV3 735 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 STK38LQ9Y2H1 464 aa15.61■□□□□ 0.09
NCAPD3-203ENST00000525964 TMTC4Q5T4D3 741 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 TWF2Q6IBS0 349 aaKnown RBP15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 SP8Q8IXZ3 490 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 SNX1Q13596 522 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 CYP4F22Q6NT55 531 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 DCLK2Q8N568 766 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 TMEM35BQ8NCS4 154 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 CFAP61Q8NHU2 1237 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 BCAS4Q8TDM0 211 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 CHMP6Q96FZ7 201 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 GJD4Q96KN9 370 aaPredicted RBP15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 PPP1R13BQ96KQ4 1090 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 SUN1O94901 812 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 ZBED1O96006 694 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 ALX1Q15699 326 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 C1orf228Q6PIY5 440 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 PADI6Q6TGC4 694 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 ISCA1Q9BUE6 129 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 C2orf40Q9H1Z8 148 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 NGRNQ9NPE2 291 aaKnown RBP15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 SUGT1Q9Y2Z0 365 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 F5H6K3 240 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 KLRC3Q07444 240 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 SLMAPQ14BN4 828 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 SPDYE1Q8NFV5 336 aaPredicted RBP15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 GDAP1Q8TB36 358 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 PIGOQ8TEQ8 1089 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 EPB41L5Q9HCM4 733 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 AXIN2Q9Y2T1 843 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 CDC42BPGQ6DT37 1551 aa15.6■□□□□ 0.09
NCAPD3-203ENST00000525964 KIF3CO14782 793 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 PCGF5Q86SE9 256 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 SMAP1Q8IYB5 467 aaPredicted RBP15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 HUS1O60921 280 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 TRIM28Q13263 835 aaKnown RBP15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 PDIK1LQ8N165 341 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 CEP95Q96GE4 821 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 NHEJ1Q9H9Q4 299 aaPredicted RBP15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 FAN1Q9Y2M0 1017 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 TTC4O95801 387 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 SLC4A1P02730 911 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 ZNF18P17022 549 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 TCP11X2Q5H9J9 407 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 PROM2Q8N271 834 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 CHAMP1Q96JM3 812 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 PVALEFA0A1B0GWK0 134 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 EVI5O60447 810 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 CSPG5O95196 566 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 ZNF579Q8NAF0 562 aaKnown RBP15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 ACAD9Q9H845 621 aa15.59■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L15C9J2P7 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L13C9JLJ4 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L11C9JVI0 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L18D6R9N7 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L22D6RA61 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L17D6RBQ6 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L19D6RCP7 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L20D6RJB6 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 SNAP23O00161 211 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 NDUFA10O95299 355 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L24Q0WX57 530 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 USP17L6PQ6QN14 398 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 VSTM4Q8IW00 320 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 VPS39Q96JC1 886 aa15.58■□□□□ 0.09
NCAPD3-203ENST00000525964 P4HBP07237 508 aaKnown RBP15.58■□□□□ 0.08
NCAPD3-203ENST00000525964 RECQLP46063 649 aaPredicted RBP15.58■□□□□ 0.08
NCAPD3-203ENST00000525964 RWDD2BP57060 319 aa15.58■□□□□ 0.08
NCAPD3-203ENST00000525964 BEST2Q8NFU1 509 aa15.58■□□□□ 0.08
NCAPD3-203ENST00000525964 Q9H521 79 aa15.58■□□□□ 0.08
NCAPD3-203ENST00000525964 TNS3Q68CZ2 1445 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms