RNA–Protein interactions for RNA: ENST00000524762.5

UBXN1-204, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 763 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-204ENST00000524762 GAS7O60861 476 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 MMP1P03956 469 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 NR5A1Q13285 461 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 LETM2Q2VYF4 491 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 B3GNT9Q6UX72 402 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 NEK8Q86SG6 692 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 ZSCAN31Q96LW9 406 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-204ENST00000524762 TEKT3Q9BXF9 490 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 UNC45AQ9H3U1 944 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 ZNF576Q9H609 170 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 DDX25Q9UHL0 483 aaKnown RBP21.47■■□□□ 1.03
UBXN1-204ENST00000524762 MSRAQ9UJ68 235 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 PCDHA11Q9Y5I1 949 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 COL1A2P08123 1366 aa21.47■■□□□ 1.03
UBXN1-204ENST00000524762 ABHD14A-ACY1A0A1B0GW23 586 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 FAM205CA6NFA0 338 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 ZBTB42B2RXF5 422 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 CHRNA1P02708 482 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 RABEP1Q15276 862 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 PPP4R3AQ6IN85 833 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 DBF4BQ8NFT6 615 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 DNAJB3Q8WWF6 145 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 CDX2Q99626 313 aaPredicted RBP21.46■■□□□ 1.03
UBXN1-204ENST00000524762 LLPHQ9BRT6 129 aaKnown RBP21.46■■□□□ 1.03
UBXN1-204ENST00000524762 NKX2-4Q9H2Z4 354 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 BRMS1Q9HCU9 246 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 SH2B1Q9NRF2 756 aaPredicted RBP21.46■■□□□ 1.03
UBXN1-204ENST00000524762 DISC1Q9NRI5 854 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 GABBR1Q9UBS5 961 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 PCDHA2Q9Y5H9 948 aa21.46■■□□□ 1.03
UBXN1-204ENST00000524762 MYOGP15173 224 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 GCFC2P16383 781 aaKnown RBP21.45■■□□□ 1.02
UBXN1-204ENST00000524762 SFNP31947 248 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 KCNJ6P48051 423 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 FOSBP53539 338 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 DEFB103AP81534 67 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 IKBKEQ14164 716 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 KRT40Q6A162 431 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 MTHFD1LQ6UB35 978 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 RSPH3Q86UC2 560 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 HERC6Q8IVU3 1022 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 BBXQ8WY36 941 aaPredicted RBP21.45■■□□□ 1.02
UBXN1-204ENST00000524762 KCNMB3Q9NPA1 279 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 SAMM50Q9Y512 469 aa21.45■■□□□ 1.02
UBXN1-204ENST00000524762 CHMP2AO43633 222 aa21.44■■□□□ 1.02
UBXN1-204ENST00000524762 EFCAB14O75071 495 aa21.44■■□□□ 1.02
UBXN1-204ENST00000524762 RPLP2P05387 115 aaKnown RBP21.44■■□□□ 1.02
UBXN1-204ENST00000524762 JAK3P52333 1124 aa21.44■■□□□ 1.02
UBXN1-204ENST00000524762 GRIN2CQ14957 1233 aa21.44■■□□□ 1.02
UBXN1-204ENST00000524762 ZNF484Q5JVG2 852 aa21.44■■□□□ 1.02
UBXN1-204ENST00000524762 RDM1Q8NG50 284 aa21.44■■□□□ 1.02
UBXN1-204ENST00000524762 UPF2Q9HAU5 1272 aaKnown RBP21.44■■□□□ 1.02
UBXN1-204ENST00000524762 SMIM35A0A1B0GVV1 85 aa21.43■■□□□ 1.02
UBXN1-204ENST00000524762 BTBD18B2RXH4 712 aa21.43■■□□□ 1.02
UBXN1-204ENST00000524762 ZNF862O60290 1169 aa21.43■■□□□ 1.02
UBXN1-204ENST00000524762 MRPS6P82932 125 aaKnown RBP21.43■■□□□ 1.02
UBXN1-204ENST00000524762 UGCGQ16739 394 aa21.43■■□□□ 1.02
UBXN1-204ENST00000524762 DIS3L2Q8IYB7 885 aaKnown RBP21.43■■□□□ 1.02
UBXN1-204ENST00000524762 SEPT8Q92599 483 aa21.43■■□□□ 1.02
UBXN1-204ENST00000524762 NAP1L4Q99733 375 aaKnown RBP21.43■■□□□ 1.02
UBXN1-204ENST00000524762 FAM49AQ9H0Q0 323 aaPredicted RBP21.43■■□□□ 1.02
UBXN1-204ENST00000524762 CDY2AQ9Y6F7 541 aa21.43■■□□□ 1.02
UBXN1-204ENST00000524762 LOXHD1Q8IVV2 1947 aa21.43■■□□□ 1.02
UBXN1-204ENST00000524762 CHD9Q3L8U1 2897 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 CCNT1O60563 726 aaKnown RBP21.42■■□□□ 1.02
UBXN1-204ENST00000524762 KLRC1P26715 233 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 TRIM29Q14134 588 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 LPIN1Q14693 890 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 MIER3Q7Z3K6 550 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 TMCO2Q7Z6W1 182 aaPredicted RBP21.42■■□□□ 1.02
UBXN1-204ENST00000524762 CKAP2LQ8IYA6 745 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 MYLIPQ8WY64 445 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 FAM167AQ96KS9 214 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 FAM20AQ96MK3 541 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 TBC1D32Q96NH3 1257 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 VAV3Q9UKW4 847 aa21.42■■□□□ 1.02
UBXN1-204ENST00000524762 EVPLQ92817 2033 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 C22orf31O95567 290 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 GHRP10912 638 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 HMGN5P82970 282 aaKnown RBP21.41■■□□□ 1.02
UBXN1-204ENST00000524762 PRKCEQ02156 737 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 FBXO47Q5MNV8 452 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.41■■□□□ 1.02
UBXN1-204ENST00000524762 POTEDQ86YR6 584 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 IL27Q8NEV9 243 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 HAS1Q92839 578 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 APBB2Q92870 758 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 IFIH1Q9BYX4 1025 aaKnown RBP21.41■■□□□ 1.02
UBXN1-204ENST00000524762 SLC28A3Q9HAS3 691 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 COL6A3P12111 3177 aa21.41■■□□□ 1.02
UBXN1-204ENST00000524762 TBX3O15119 743 aa21.4■■□□□ 1.02
UBXN1-204ENST00000524762 ST18O60284 1047 aa21.4■■□□□ 1.02
UBXN1-204ENST00000524762 OATP04181 439 aa21.4■■□□□ 1.02
UBXN1-204ENST00000524762 CA3P07451 260 aa21.4■■□□□ 1.02
UBXN1-204ENST00000524762 PPP2R5CQ13362 524 aa21.4■■□□□ 1.02
UBXN1-204ENST00000524762 PPP2R2DQ66LE6 453 aa21.4■■□□□ 1.02
UBXN1-204ENST00000524762 NME8Q8N427 588 aa21.4■■□□□ 1.02
UBXN1-204ENST00000524762 TRPV2Q9Y5S1 764 aa21.4■■□□□ 1.02
UBXN1-204ENST00000524762 KDM3AQ9Y4C1 1321 aa21.39■■□□□ 1.01
UBXN1-204ENST00000524762 WNT7AO00755 349 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms