RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 SPDYE3A6NKU9 549 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 EIF3DO15371 548 aaKnown RBP eCLIP9.77□□□□□ -0.85
PKP3-202ENST00000524646 EIF3HO15372 352 aaKnown RBP eCLIP9.77□□□□□ -0.85
PKP3-202ENST00000524646 KIF4AO95239 1232 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 EYA4O95677 639 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 NDUFB10O96000 172 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 SPATA31C1P0DKV0 1188 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 XRCC5P13010 732 aaKnown RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 UCHL3P15374 230 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 RPL13P26373 211 aaKnown RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 JAM2P57087 298 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 HDLBPQ00341 1268 aaKnown RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 ARID5AQ03989 594 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 PABPC4Q13310 644 aaKnown RBP eCLIP9.77□□□□□ -0.85
PKP3-202ENST00000524646 NFIL3Q16649 462 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 EXOC3L4Q17RC7 722 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 TTMPQ5BVD1 217 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 VPS36Q86VN1 386 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 FBXO11Q86XK2 927 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 CATSPER3Q86XQ3 398 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 CD302Q8IX05 232 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 EIF1ADQ8N9N8 165 aaKnown RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 USP38Q8NB14 1042 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 CASKIN2Q8WXE0 1202 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.77□□□□□ -0.85
PKP3-202ENST00000524646 PBKQ96KB5 322 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 CALR3Q96L12 384 aaKnown RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 SPAG5Q96R06 1193 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 P2RX7Q99572 595 aaKnown RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 POLR3CQ9BUI4 534 aaPredicted RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 IDI2Q9BXS1 227 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 SIX2Q9NPC8 291 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 INTUQ9ULD6 942 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 SYNPO2Q9UMS6 1093 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 DNM3Q9UQ16 869 aa9.77□□□□□ -0.85
PKP3-202ENST00000524646 ATXN2Q99700 1313 aaKnown RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 FAM196BA6NMK8 535 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 A6NNZ2 444 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 PGRMC1O00264 195 aaKnown RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 FLOT1O75955 427 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 GLI1P08151 1106 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 CYP3A4P08684 503 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 ACTN1P12814 892 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 FERP16591 822 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 PON1P27169 355 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 HOXD13P35453 343 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 HSPA9P38646 679 aaKnown RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 DNA2P51530 1060 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 CORO7P57737 925 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 GNGT1P63211 74 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 MRPS25P82663 173 aaKnown RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 GUCY2DQ02846 1103 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 PTK2Q05397 1052 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 RPS6KA1Q15418 735 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 TUBB8Q3ZCM7 444 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 CERKLQ49MI3 558 aaPredicted RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 DCAF17Q5H9S7 520 aaPredicted RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 CFAP58Q5T655 872 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 TATDN1Q6P1N9 297 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 KDM7AQ6ZMT4 941 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 ZNF571Q7Z3V5 609 aaPredicted RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 IRF2BP2Q7Z5L9 587 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 LRRC57Q8N9N7 239 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 C1orf131Q8NDD1 294 aaKnown RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 CCDC43Q96MW1 224 aaKnown RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 ZIM3Q96PE6 472 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 KRT12Q99456 494 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 RUSC1Q9BVN2 902 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 CAPS2Q9BXY5 557 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 OLFML3Q9NRN5 406 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 GCNT4Q9P109 453 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 PI4KBQ9UBF8 816 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 FAM198AQ9UFP1 575 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 RSPH14Q9UHP6 348 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 TMEM59LQ9UK28 342 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 NFU1Q9UMS0 254 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 RABGAP1Q9Y3P9 1069 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 NOC2LQ9Y3T9 749 aaKnown RBP9.76□□□□□ -0.85
PKP3-202ENST00000524646 DAAM1Q9Y4D1 1078 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 PARP14Q460N5 1801 aa9.76□□□□□ -0.85
PKP3-202ENST00000524646 FER1L6Q2WGJ9 1857 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 SHTN1A0MZ66 631 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 DDTLA6NHG4 134 aaPredicted RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 RSPH10B2B2RC85 870 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 BHMG1C9JSJ3 638 aaPredicted RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 FAM86B1E9PN63 330 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 UBAP1LF5GYI3 381 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 G3V3G9 751 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 PIK3CDO00329 1044 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 MEIS1O00470 390 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 TRIM66O15016 1216 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 MSH4O15457 936 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 RAD51CO43502 376 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 RAD21O60216 631 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 ONECUT3O60422 494 aaPredicted RBP9.75□□□□□ -0.85
PKP3-202ENST00000524646 AKAP3O75969 853 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 FAM13AO94988 1023 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 H2AFZP0C0S5 128 aa9.75□□□□□ -0.85
PKP3-202ENST00000524646 FAM86B2P0C5J1 330 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms