RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 NOC4LQ9BVI4 516 aaKnown RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 VPS16Q9H269 839 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 JPH1Q9HDC5 661 aaPredicted RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 TAB2Q9NYJ8 693 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 BTBD7Q9P203 1132 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
VPS13B-212ENST00000524330 FAM184BQ9ULE4 1060 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 A0A0G2JMZ2 1700 aa11.03□□□□□ -0.64
VPS13B-212ENST00000524330 TRIM49BA6NDI0 452 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 ASB14A6NK59 587 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 PDXKO00764 312 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 DHX15O43143 795 aaKnown RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 ARHGAP6O43182 974 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 ZSCAN12O43309 604 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 STX10O60499 249 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 GCNT3O95395 438 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 ERCC3P19447 782 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 SMTNP53814 917 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 SNRPFP62306 86 aaKnown RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 PSMC6P62333 389 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 ITGB3BPQ13352 177 aaPredicted RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 KNOP1Q1ED39 458 aaKnown RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 BMT2Q1RMZ1 405 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 CCDC144BQ3MJ40 725 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 ARSHQ5FYA8 562 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 WDR78Q5VTH9 848 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 FAM160B1Q5W0V3 765 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 C1orf186Q6ZWK4 172 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 SFR1Q86XK3 245 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 EXOC8Q8IYI6 725 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 PIGOQ8TEQ8 1089 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 PANX2Q96RD6 677 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 MED15Q96RN5 788 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 PARK7Q99497 189 aaKnown RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 DUSP9Q99956 384 aaKnown RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 SEMA6BQ9H3T3 888 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 TMEM206Q9H813 350 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 RRAGDQ9NQL2 400 aaPredicted RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 TYW1Q9NV66 732 aaKnown RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 ZNHIT6Q9NWK9 470 aaKnown RBP11.02□□□□□ -0.65
VPS13B-212ENST00000524330 SLC5A4Q9NY91 659 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 EXOC7Q9UPT5 735 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 PPME1Q9Y570 386 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 IVNS1ABPQ9Y6Y0 642 aa11.02□□□□□ -0.65
VPS13B-212ENST00000524330 CCL15-CCL14A0A0B4J2E2 113 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 BACH1O14867 736 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 STRNO43815 780 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 CELF2O95319 508 aaKnown RBP11.01□□□□□ -0.65
VPS13B-212ENST00000524330 EPB41P11171 864 aaKnown RBP11.01□□□□□ -0.65
VPS13B-212ENST00000524330 YWHABP31946 246 aaKnown RBP11.01□□□□□ -0.65
VPS13B-212ENST00000524330 ERVK-9P63128 1117 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 ERVK-24P63145 666 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 RAD51AP2Q09MP3 1159 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 TBC1D8BQ0IIM8 1120 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 TBX2Q13207 712 aaPredicted RBP11.01□□□□□ -0.65
VPS13B-212ENST00000524330 CCL15Q16663 113 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 XKR9Q5GH70 373 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 ODR4Q5SWX8 454 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 MOB2Q70IA6 237 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 MCPH1Q8NEM0 835 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 ZNF507Q8TCN5 953 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 KIFAP3Q92845 792 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 BAG1Q99933 345 aaPredicted RBP11.01□□□□□ -0.65
VPS13B-212ENST00000524330 RUSC1Q9BVN2 902 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 KCNF1Q9H3M0 494 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 C17orf75Q9HAS0 396 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 SPTLC3Q9NUV7 552 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
VPS13B-212ENST00000524330 TBC1D7Q9P0N9 293 aa11.01□□□□□ -0.65
VPS13B-212ENST00000524330 NPHP3-ACAD11A0A0J9YXS1 232 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 SLC16A3O15427 465 aaKnown RBP11□□□□□ -0.65
VPS13B-212ENST00000524330 KCNA2P16389 499 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 ZNF131P52739 623 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 ADAM9Q13443 819 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 MYBPC2Q14324 1141 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 LRRC41Q15345 812 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 NFIL3Q16649 462 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 VWA3BQ502W6 1294 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 GPAT2Q6NUI2 795 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 DLK2Q6UY11 383 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 SEPT14Q6ZU15 432 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 APTXQ7Z2E3 356 aaKnown RBP11□□□□□ -0.65
VPS13B-212ENST00000524330 NELFCDQ8IXH7 590 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 SYCP3Q8IZU3 236 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 ABRAQ8N0Z2 381 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 FAM133AQ8N9E0 248 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 SCFD1Q8WVM8 642 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 HVCN1Q96D96 273 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
VPS13B-212ENST00000524330 FAM167AQ96KS9 214 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
VPS13B-212ENST00000524330 KCND1Q9NSA2 647 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 NRBP2Q9NSY0 501 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 GABBR1Q9UBS5 961 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 LUC7L2Q9Y383 392 aaKnown RBP11□□□□□ -0.65
VPS13B-212ENST00000524330 PCDHA2Q9Y5H9 948 aa11□□□□□ -0.65
VPS13B-212ENST00000524330 PDHXO00330 501 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms