RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033		M0R2N6	131 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	N4BP1	O75113	896 aa	Known RBP	8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	PRDM1	O75626	825 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	NDUFA10	O95299	355 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	RPN1	P04843	607 aa	Known RBP	8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	IVL	P07476	585 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	GJB1	P08034	283 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	ELN	P15502	786 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	CDC25A	P30304	524 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	CCT6A	P40227	531 aa	Known RBP	8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	GJA8	P48165	433 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	VAC14	Q08AM6	782 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	RRP12	Q5JTH9	1297 aa	Known RBP	8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	ADSSL1	Q8N142	457 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	MB21D1	Q8N884	522 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	NUP133	Q8WUM0	1156 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	RUBCN	Q92622	972 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	ASCC2	Q9H1I8	757 aa	Predicted RBP	8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	THAP9	Q9H5L6	903 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	ZSWIM4	Q9H7M6	989 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	SUGCT	Q9HAC7	445 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	GINM1	Q9NU53	330 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	EVA1B	Q9NVM1	165 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	RMND1	Q9NWS8	449 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	TMOD4	Q9NZQ9	345 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	LCMT1	Q9UIC8	334 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	FKBPL	Q9UIM3	349 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	HPCAL4	Q9UM19	191 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	CAPN11	Q9UMQ6	739 aa		8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	COL2A1	P02458	1487 aa	Predicted RBP	8.69	□□□□□ -1.02
SPIDR-223	ENST00000524033	MYH7B	A7E2Y1	1941 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	MAGEB6P1	A0A0J9YX57	407 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	ANO9	A1A5B4	782 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	SMIM22	K7EJ46	135 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	MYO1C	O00159	1063 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	N4BP3	O15049	544 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	ADAMTS3	O15072	1205 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	SHOX2	O60902	331 aa	Predicted RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	GDF11	O95390	407 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	SYF2	O95926	243 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	PARP1	P09874	1014 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	RHOXF2B	P0C7M4	288 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	ATP2B1	P20020	1258 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	HOXA7	P31268	230 aa	Predicted RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	KRT9	P35527	623 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	LONP1	P36776	959 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	IRX3	P78415	501 aa	Predicted RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	CDK17	Q00537	523 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	AKAP17A	Q02040	695 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	IRF5	Q13568	498 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	ZNF174	Q15697	407 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	PFKFB3	Q16875	520 aa	Predicted RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	FAM110C	Q1W6H9	321 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	NAALADL2	Q58DX5	795 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	HABP4	Q5JVS0	413 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	RRAGB	Q5VZM2	374 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	NCAPH2	Q6IBW4	605 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	TTI2	Q6NXR4	508 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	WDR59	Q6PJI9	974 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	LRRC31	Q6UY01	552 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	SRBD1	Q8N5C6	995 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	DAGLB	Q8NCG7	672 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	CTCFL	Q8NI51	663 aa	Predicted RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	NOC3L	Q8WTT2	800 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	CPLX3	Q8WVH0	158 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	DPF3	Q92784	378 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	RPGRIP1	Q96KN7	1286 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	P2RX7	Q99572	595 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	CHP1	Q99653	195 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	SLF1	Q9BQI6	1058 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	RHOXF2	Q9BQY4	288 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	UNC93B1	Q9H1C4	597 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	DNAJC18	Q9H819	358 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	BRMS1	Q9HCU9	246 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	VPS18	Q9P253	973 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	GDA	Q9Y2T3	454 aa		8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	RRP15	Q9Y3B9	282 aa	Known RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	EPN1	Q9Y6I3	576 aa	Predicted RBP	8.68	□□□□□ -1.02
SPIDR-223	ENST00000524033	SZT2	Q5T011	3432 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033		A0A0U1RQG5	324 aa	Predicted RBP	8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	TTC26	A0AVF1	554 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	EIF3CL	B5ME19	914 aa	Known RBP	8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033		H0YGN5	161 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	ZBTB24	O43167	697 aa	Predicted RBP	8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	RHOBTB3	O94955	611 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	SGPL1	O95470	568 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	CP	P00450	1065 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	F12	P00748	615 aa	Predicted RBP	8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	GH2	P01242	217 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	INHA	P05111	366 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	MYL1	P05976	194 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	SCG2	P13521	617 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	EEF1G	P26641	437 aa	Known RBP	8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	PRCP	P42785	496 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	ITIH3	Q06033	890 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	CKAP4	Q07065	602 aa	Known RBP	8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	AGER	Q15109	404 aa		8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	SHROOM1	Q2M3G4	852 aa	Predicted RBP	8.67	□□□□□ -1.02
SPIDR-223	ENST00000524033	CERKL	Q49MI3	558 aa	Predicted RBP	8.67	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms