RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 KISS1RQ969F8 398 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-209ENST00000521559 MAGEB10Q96LZ2 347 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-209ENST00000521559 SAMD11Q96NU1 681 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 DNAJC7Q99615 494 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 RIC8BQ9NVN3 520 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 SRPK3Q9UPE1 567 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 ZDHHC9Q9Y397 364 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 HECW1Q76N89 1606 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 MAP3K1Q13233 1512 aa4.7□□□□□ -1.66
VPS13B-209ENST00000521559 PCF11O94913 1555 aaKnown RBP4.7□□□□□ -1.66
VPS13B-209ENST00000521559 ZNF839A8K0R7 811 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 NPTXRO95502 500 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 CRTAMO95727 393 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 SRGAP2CP0DJJ0 459 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 PYGMP11217 842 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 PDE6AP16499 860 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 PTPN1P18031 435 aaKnown RBP4.69□□□□□ -1.66
VPS13B-209ENST00000521559 TBC1D10BQ4KMP7 808 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-209ENST00000521559 EFCAB2Q5VUJ9 269 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 PKN3Q6P5Z2 889 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 ARHGEF18Q6ZSZ5 1173 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 OSTM1Q86WC4 334 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 KBTBD2Q8IY47 623 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 TTC9BQ8N6N2 239 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 JMYQ8N9B5 988 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 MRPL4Q9BYD3 311 aaKnown RBP4.69□□□□□ -1.66
VPS13B-209ENST00000521559 CD244Q9BZW8 370 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 OSBPL2Q9H1P3 480 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 ARHGAP28Q9P2N2 729 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 NDOR1Q9UHB4 597 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 SFMBT1Q9UHJ3 866 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 ZFP69BQ9UJL9 534 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 WASF3Q9UPY6 502 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 TELO2Q9Y4R8 837 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 PCDHA9Q9Y5H5 950 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 CD109Q6YHK3 1445 aa4.69□□□□□ -1.66
VPS13B-209ENST00000521559 ZCCHC11Q5TAX3 1644 aaKnown RBP4.68□□□□□ -1.66
VPS13B-209ENST00000521559 CCDC66A2RUB6 948 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 H0Y858 1186 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 ACOT7O00154 380 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 B4GALT3O60512 393 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 CLASP2O75122 1294 aaKnown RBP4.68□□□□□ -1.66
VPS13B-209ENST00000521559 KNG1P01042 644 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 KRT15P19012 456 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 MAGEA10P43363 369 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-209ENST00000521559 GLRBP48167 497 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 DNM2P50570 870 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 HERVK_113P62684 666 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 PPP2CBP62714 309 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 PPP2CAP67775 309 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 LACTBP83111 547 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-209ENST00000521559 DBPQ10586 325 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-209ENST00000521559 TRIM61Q5EBN2 209 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 Q6ZUG5 572 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 REXO1L1PQ8IX06 675 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 IFNL2Q8IZJ0 200 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 CHST13Q8NET6 341 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 WDR48Q8TAF3 677 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 SH3RF2Q8TEC5 729 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 LOXL4Q96JB6 756 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 RBM15Q96T37 977 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS13B-209ENST00000521559 GPR20Q99678 358 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 JADE2Q9NQC1 790 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 KCND1Q9NSA2 647 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 SMPD4Q9NXE4 827 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 RBPJLQ9UBG7 517 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 ADAM29Q9UKF5 820 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 GLI2P10070 1586 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 LRRC9Q6ZRR7 1453 aa4.68□□□□□ -1.66
VPS13B-209ENST00000521559 PHLDB1Q86UU1 1377 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 PLCH2O75038 1416 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 TCRBV5S4A2TA0A5A2 114 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 NPEPPSL1A6NEC2 478 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 CUTAO60888 179 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 KLHL18O94889 574 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 COL6A1P12109 1028 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 ZNF568Q3ZCX4 644 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 C2orf27AQ580R0 203 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 SLFN13Q68D06 897 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 HHIPL2Q6UWX4 724 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 RALYLQ86SE5 291 aaKnown RBP4.67□□□□□ -1.66
VPS13B-209ENST00000521559 PTRH1Q86Y79 214 aaKnown RBP4.67□□□□□ -1.66
VPS13B-209ENST00000521559 STPG3Q8N7X2 389 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 GSTCDQ8NEC7 633 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 MBD6Q96DN6 1003 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 MRFAP1L1Q96HT8 127 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 AJUBAQ96IF1 538 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 SLC52A2Q9HAB3 445 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 CFDP1Q9UEE9 299 aaPredicted RBP4.67□□□□□ -1.66
VPS13B-209ENST00000521559 CBLCQ9ULV8 474 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 MAGI3Q5TCQ9 1506 aa4.67□□□□□ -1.66
VPS13B-209ENST00000521559 CCNB3Q8WWL7 1395 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 TIAM1Q13009 1591 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.66□□□□□ -1.66
VPS13B-209ENST00000521559 PRAMEF25A6NGN4 478 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 FAM90A27PA6NNH2 459 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 B4E1Z4 1266 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 ZNF561-AS1K7EIQ3 104 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 MAN2B1O00754 1011 aa4.66□□□□□ -1.66
VPS13B-209ENST00000521559 KCNQ2O43526 872 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms