RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PFKFB1P16118 471 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 CMA1P23946 247 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 SNX17Q15036 470 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 PDXDC2PQ6P474 469 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 PLPPR4Q7Z2D5 763 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 C7orf31Q8N865 590 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 SNX29Q8TEQ0 813 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 PNMA5Q96PV4 448 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 EIF2AK1Q9BQI3 630 aaKnown RBP17.17■□□□□ 0.34
LSM1-203ENST00000520755 RAB34Q9BZG1 259 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 CCSER1Q9C0I3 900 aa17.17■□□□□ 0.34
LSM1-203ENST00000520755 WRAP73Q9P2S5 460 aaPredicted RBP17.17■□□□□ 0.34
LSM1-203ENST00000520755 A0A1B0GVL5 298 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 POTEB3A0JP26 581 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 RGS19P49795 217 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 UBE2HP62256 183 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 GRB10Q13322 594 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 KARSQ15046 597 aaKnown RBP17.16■□□□□ 0.34
LSM1-203ENST00000520755 EPHA7Q15375 998 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 HYIQ5T013 277 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 NFRKBQ6P4R8 1299 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 POTEBQ6S5H4 581 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 TRMT1LQ7Z2T5 733 aaKnown RBP17.16■□□□□ 0.34
LSM1-203ENST00000520755 CABP7Q86V35 215 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 CKAP2LQ8IYA6 745 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 FSIP1Q8NA03 581 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 SLC43A3Q8NBI5 491 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 BANK1Q8NDB2 785 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 AFAP1L1Q8TED9 768 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 MRPS27Q92552 414 aaKnown RBP17.16■□□□□ 0.34
LSM1-203ENST00000520755 DPF3Q92784 378 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 DYDC2Q96IM9 177 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 HSD17B14Q9BPX1 270 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 RGL1Q9NZL6 768 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 HDAC6Q9UBN7 1215 aa17.16■□□□□ 0.34
LSM1-203ENST00000520755 SMIM10L2AP0DMW4 78 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 SMIM10L2BP0DMW5 78 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 LIG1P18858 919 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 CDK7P50613 346 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 CYP4A11Q02928 519 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 TLE2Q04725 743 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 PLCB4Q15147 1175 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 TMEM119Q4V9L6 283 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 C1orf53Q5VUE5 145 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 POTEGQ6S5H5 508 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 CATSPER3Q86XQ3 398 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 LXNQ9BS40 222 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 POLR3CQ9BUI4 534 aaPredicted RBP17.15■□□□□ 0.34
LSM1-203ENST00000520755 TRPC6Q9Y210 931 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 MAFBQ9Y5Q3 323 aaPredicted RBP17.15■□□□□ 0.34
LSM1-203ENST00000520755 MROH7Q68CQ1 1323 aa17.15■□□□□ 0.34
LSM1-203ENST00000520755 DDX11L8A8MPP1 907 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 GOLGA6L22H0YM25 854 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 ZNF862O60290 1169 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 SLITRK3O94933 977 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 RPA1P27694 616 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 CCT6AP40227 531 aaKnown RBP17.14■□□□□ 0.33
LSM1-203ENST00000520755 SLC26A2P50443 739 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 NDUFA8P51970 172 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 CTTNQ14247 550 aaKnown RBP17.14■□□□□ 0.33
LSM1-203ENST00000520755 E2F4Q16254 413 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 KRT79Q5XKE5 535 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 HAUS3Q68CZ6 603 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 KCNK18Q7Z418 384 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 C7orf61Q8IZ16 206 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 ENGASEQ8NFI3 743 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 NEK9Q8TD19 979 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 ATP6V0A1Q93050 837 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 SEZ6LQ9BYH1 1024 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 TRPV6Q9H1D0 765 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 TRMT13Q9NUP7 481 aaKnown RBP17.14■□□□□ 0.33
LSM1-203ENST00000520755 GTF2IRD1Q9UHL9 959 aa17.14■□□□□ 0.33
LSM1-203ENST00000520755 EVPLQ92817 2033 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 DCDC2CA8MYV0 355 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 TLR3O15455 904 aaKnown RBP17.13■□□□□ 0.33
LSM1-203ENST00000520755 EVI5O60447 810 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 B4GALT4O60513 344 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
LSM1-203ENST00000520755 PLCG1P19174 1290 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 ATP4AP20648 1035 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 UBA7P41226 1012 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 QARSP47897 775 aaKnown RBP17.13■□□□□ 0.33
LSM1-203ENST00000520755 PSMC5P62195 406 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 PRKCEQ02156 737 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 PTPN11Q06124 597 aaPredicted RBP17.13■□□□□ 0.33
LSM1-203ENST00000520755 PPFIA1Q13136 1202 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 NFKBIBQ15653 356 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 NAALADL2Q58DX5 795 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 GDF6Q6KF10 455 aaPredicted RBP17.13■□□□□ 0.33
LSM1-203ENST00000520755 ANKRD33Q7Z3H0 272 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 SESTD1Q86VW0 696 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 FMR1NBQ8N0W7 255 aaPredicted RBP17.13■□□□□ 0.33
LSM1-203ENST00000520755 ERMNQ8TAM6 284 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 ATP8B4Q8TF62 1192 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 TUFT1Q9NNX1 390 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 SETD4Q9NVD3 440 aa17.13■□□□□ 0.33
LSM1-203ENST00000520755 KDM3AQ9Y4C1 1321 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms