RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
MCM4-202ENST00000517709 FAM49AQ9H0Q0 323 aaPredicted RBP13.46□□□□□ -0.25
MCM4-202ENST00000517709 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.25
MCM4-202ENST00000517709 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
MCM4-202ENST00000517709 WNT7AO00755 349 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 CAND2O75155 1236 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 KCNJ6P48051 423 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 STAT5BP51692 787 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 LPIN1Q14693 890 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 INF2Q27J81 1249 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 UNC45AQ9H3U1 944 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 SLC28A3Q9HAS3 691 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 CDY2AQ9Y6F7 541 aa13.45□□□□□ -0.26
MCM4-202ENST00000517709 ABHD14A-ACY1A0A1B0GW23 586 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 POTEB3A0JP26 581 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 TMEM150BA6NC51 233 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 BACH1O14867 736 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 CHMP2AO43633 222 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 ZNF862O60290 1169 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 GJB5O95377 273 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 PARNO95453 639 aaKnown RBP13.44□□□□□ -0.26
MCM4-202ENST00000517709 GNAT1P11488 350 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 NEK4P51957 841 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 SWSAP1Q6NVH7 229 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 POTEBQ6S5H4 581 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 PLPPR4Q7Z2D5 763 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 TRMT1LQ7Z2T5 733 aaKnown RBP13.44□□□□□ -0.26
MCM4-202ENST00000517709 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 ETNPPLQ8TBG4 499 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 PHOSPHO2Q8TCD6 241 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 ATP8B4Q8TF62 1192 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 SLC5A5Q92911 643 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 TNFRSF25Q93038 417 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 MBOAT7Q96N66 472 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 PPP1R16BQ96T49 567 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 AGO3Q9H9G7 860 aaKnown RBP13.44□□□□□ -0.26
MCM4-202ENST00000517709 ZNF302Q9NR11 478 aa13.44□□□□□ -0.26
MCM4-202ENST00000517709 ORC3Q9UBD5 711 aaPredicted RBP13.44□□□□□ -0.26
MCM4-202ENST00000517709 TLL1O43897 1013 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 LPXNO60711 386 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 C22orf31O95567 290 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 MRPS6P82932 125 aaKnown RBP13.43□□□□□ -0.26
MCM4-202ENST00000517709 NR5A1Q13285 461 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 FBXO47Q5MNV8 452 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
MCM4-202ENST00000517709 TAF2Q6P1X5 1199 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 PDXDC2PQ6P474 469 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 MTHFD1LQ6UB35 978 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 B3GNT9Q6UX72 402 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 MYOCDQ8IZQ8 938 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 IFIH1Q9BYX4 1025 aaKnown RBP13.43□□□□□ -0.26
MCM4-202ENST00000517709 GABBR1Q9UBS5 961 aa13.43□□□□□ -0.26
MCM4-202ENST00000517709 MAFBQ9Y5Q3 323 aaPredicted RBP13.43□□□□□ -0.26
MCM4-202ENST00000517709 TCF20Q9UGU0 1960 aaKnown RBP13.42□□□□□ -0.26
MCM4-202ENST00000517709 C5orf42Q9H799 3197 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 LINC01553A4QN01 128 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 PSMD10O75832 226 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 KRT76Q01546 638 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 PRKCEQ02156 737 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 IKBKEQ14164 716 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 NONOQ15233 471 aaKnown RBP eCLIP13.42□□□□□ -0.26
MCM4-202ENST00000517709 Q4G0T1 1027 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 LRCH2Q5VUJ6 765 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 MIS18BP1Q6P0N0 1132 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
MCM4-202ENST00000517709 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 ARNTL2Q8WYA1 636 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 CDHR5Q9HBB8 845 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 VAV3Q9UKW4 847 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 MTUS1Q9ULD2 1270 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 PCDHA2Q9Y5H9 948 aa13.42□□□□□ -0.26
MCM4-202ENST00000517709 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 GAS7O60861 476 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 CDKL5O76039 1030 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 LINC00271P0C7V0 271 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 CYP3A7P24462 503 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 CD52P31358 61 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 USP11P51784 963 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 CLCN3P51790 818 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
MCM4-202ENST00000517709 CCDC85BQ15834 202 aaPredicted RBP13.41□□□□□ -0.26
MCM4-202ENST00000517709 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 FAM160B1Q5W0V3 765 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 MCTP2Q6DN12 878 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 CPLX2Q6PUV4 134 aaKnown RBP13.41□□□□□ -0.26
MCM4-202ENST00000517709 PIK3AP1Q6ZUJ8 805 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
MCM4-202ENST00000517709 PPM1EQ8WY54 764 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 SEPT8Q92599 483 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 SH2D3AQ9BRG2 576 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 TMX1Q9H3N1 280 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 RC3H2Q9HBD1 1191 aaKnown RBP13.41□□□□□ -0.26
MCM4-202ENST00000517709 TBC1D22BQ9NU19 505 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 TRPV2Q9Y5S1 764 aa13.41□□□□□ -0.26
MCM4-202ENST00000517709 COL1A2P08123 1366 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms