RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 FAM90A13PP0C7W8 464 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 FAM90A24PP0C7X0 464 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 RHCEP18577 417 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MPLP40238 635 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SMAD3P84022 425 aaKnown RBP0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MPP3Q13368 585 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ZNF585BQ52M93 769 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 NBPF12Q5TAG4 269 aaPredicted RBP0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ALKBH2Q6NS38 261 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SEC14L1Q92503 715 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 LMLNQ96KR4 655 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SRRTQ9BXP5 876 aaKnown RBP0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 CEP44Q9C0F1 390 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SPRTNQ9H040 489 aaPredicted RBP0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 NRIP3Q9NQ35 241 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ASB6Q9NWX5 421 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 DTLQ9NZJ0 730 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 NCOR1O75376 2440 aa0.28□□□□□ -2.36
SCARNA21.1-201ENST00000515996 TEP1Q99973 2627 aaKnown RBP0.28□□□□□ -2.37
SCARNA21.1-201ENST00000515996 HELZ2Q9BYK8 2649 aaKnown RBP0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 FAM90A10PA6NDY2 464 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 B4E1Z4 1266 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SLC26A4O43511 780 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SOCS5O75159 536 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 DDNO94850 711 aaPredicted RBP0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 LRG1P02750 347 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 PRKCGP05129 697 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 PLCG1P19174 1290 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 POLD1P28340 1107 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 HOXA4Q00056 320 aaPredicted RBP0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SEPT6Q14141 434 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ZNF169Q14929 603 aaPredicted RBP0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 BMT2Q1RMZ1 405 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 HDGFL1Q5TGJ6 251 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 HTR3DQ70Z44 454 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 KRT73Q86Y46 540 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ARHGEF19Q8IW93 802 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SLC44A3Q8N4M1 653 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 STPG3Q8N7X2 389 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 DDX17Q92841 729 aaKnown RBP0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 RHOVQ96L33 236 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 KCND1Q9NSA2 647 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 KLHL3Q9UH77 587 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 PRO0461Q9UI25 63 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ZFP69BQ9UJL9 534 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SORCS3Q9UPU3 1222 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ACIN1Q9UKV3 1341 aaKnown RBP0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 CUL9Q8IWT3 2517 aa0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 COL4A4P53420 1690 aaPredicted RBP0.27□□□□□ -2.37
SCARNA21.1-201ENST00000515996 STAB1Q9NY15 2570 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ANKRD17O75179 2603 aaKnown RBP0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SPRR5A0A1B0GTR4 108 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 TMEM200CA6NKL6 621 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 GOLGA6L6A8MZA4 724 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 CHURC1-FNTBB4DL54 471 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 UBOX5O94941 541 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 TCEA1P23193 301 aaKnown RBP0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 GBP1P32455 592 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 RARRES1P49788 294 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 RGS3P49796 1198 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 TOP3AQ13472 1001 aaPredicted RBP0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 KRT32Q14532 448 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ELAVL1Q15717 326 aaKnown RBP0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 TMEM201Q5SNT2 666 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 C1QL3Q5VWW1 255 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 CWF19L1Q69YN2 538 aaKnown RBP0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SPAG16Q8N0X2 631 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 C3orf58Q8NDZ4 430 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 EPS8L3Q8TE67 593 aaKnown RBP0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 FBXO41Q8TF61 875 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 THOC3Q96J01 351 aaKnown RBP0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SCYL1Q96KG9 808 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SLITRK1Q96PX8 696 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 MNTQ99583 582 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 HERPUD2Q9BSE4 406 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 C1QTNF5Q9BXJ0 243 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 VRTNQ9H8Y1 702 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 CCDC87Q9NVE4 849 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 PPP4R2Q9NY27 417 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 FOXJ2Q9P0K8 574 aa0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 RGS17Q9UGC6 210 aaPredicted RBP0.26□□□□□ -2.37
SCARNA21.1-201ENST00000515996 KMT2CQ8NEZ4 4911 aaKnown RBP0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 PIPSLA2A3N6 862 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 H0Y8X5 98 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 CUTAO60888 179 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SCAF4O95104 1147 aaKnown RBP0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 IFNGR1P15260 489 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SCP2P22307 547 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 GLRBP48167 497 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 PLCD1P51178 756 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 FAM189BP81408 668 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 EXOSC10Q01780 885 aaKnown RBP0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ADAM15Q13444 863 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 RIN1Q13671 783 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 LLGL1Q15334 1064 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 LRRC41Q15345 812 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 MST1LQ2TV78 715 aa0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ZIK1Q3SY52 487 aaPredicted RBP0.25□□□□□ -2.37
SCARNA21.1-201ENST00000515996 USP30Q70CQ3 517 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms