RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 PTGISQ16647 500 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 EXOC3L4Q17RC7 722 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 NAA35Q5VZE5 725 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 ALKBH5Q6P6C2 394 aaKnown RBP18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 MMS22LQ6ZRQ5 1243 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 DNAAF5Q86Y56 855 aa18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 RBM46Q8TBY0 533 aaKnown RBP18.4■□□□□ 0.54
TSPAN17-209ENST00000515708 ZBTB48P10074 688 aaPredicted RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 SHMT1P34896 483 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 HOXD13P35453 343 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 MDH1P40925 334 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 GIT2Q14161 759 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 KNOP1Q1ED39 458 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 SPATS2Q86XZ4 545 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 SLFN12Q8IYM2 578 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 TBC1D16Q8TBP0 767 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 CALR3Q96L12 384 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 ANO3Q9BYT9 981 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 MYO3BQ8WXR4 1341 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 CYP3A7-CYP3A51PA0A087WV96 503 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 PGRMC1O00264 195 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 XRCC5P13010 732 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 CYP3A7P24462 503 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 BRD2P25440 801 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 HSD17B3P37058 310 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 PRKCIP41743 596 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 GTF2IP78347 998 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 PTPROQ16827 1216 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 LRIG3Q6UXM1 1119 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 CATSPER3Q86XQ3 398 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 SUGP1Q8IWZ8 645 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 TPCN2Q8NHX9 752 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 MBOAT7Q96N66 472 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 PAGR1Q9BTK6 254 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 GLT8D2Q9H1C3 349 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 TMBIM4Q9HC24 238 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 AFF2P51816 1311 aa18.39■□□□□ 0.53
TSPAN17-209ENST00000515708 SART1O43290 800 aaKnown RBP18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 FLOT1O75955 427 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 PSMC6P62333 389 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 SPIRE1Q08AE8 756 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 EPM2AIP1Q7L775 607 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 SFR1Q86XK3 245 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 METTL13Q8N6R0 699 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 AP1M1Q9BXS5 423 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 NENFQ9UMX5 172 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 TAF1LQ8IZX4 1826 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 GOLGA6L10A6NI86 522 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 BHMG1C9JSJ3 638 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 MEFVO15553 781 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.531e-8■■■■□ 20.2
TSPAN17-209ENST00000515708 UAP1Q16222 522 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 QRICH1Q2TAL8 776 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 DCAF17Q5H9S7 520 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 REEP2Q9BRK0 252 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 NOC2LQ9Y3T9 749 aaKnown RBP18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 PCDHA1Q9Y5I3 950 aa18.38■□□□□ 0.53
TSPAN17-209ENST00000515708 H0YGN5 161 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 MPHOSPH10O00566 681 aaKnown RBP18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 PDXKO00764 312 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 AKAP3O75969 853 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 KIAA0754O94854 1291 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 ANXA13P27216 316 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 GTF2A1P52655 376 aaPredicted RBP18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 SEC24CP53992 1094 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 EPHA7Q15375 998 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 DDX42Q86XP3 938 aaKnown RBP eCLIP18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 ZNF473Q8WTR7 871 aaKnown RBP18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 LRRC45Q96CN5 670 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 DDX47Q9H0S4 455 aaKnown RBP18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 NFS1Q9Y697 457 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 THSD7AQ9UPZ6 1657 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 F8W031 263 aaPredicted RBP18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 FBXW10Q5XX13 1052 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 NLRP14Q86W24 1093 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 ETNPPLQ8TBG4 499 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 MYCBPAPQ8TBZ2 947 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 CCT8L2Q96SF2 557 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 FBXL5Q9UKA1 691 aa18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 AJAP1Q9UKB5 411 aaPredicted RBP18.37■□□□□ 0.53
TSPAN17-209ENST00000515708 ATP8B3O60423 1300 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 GREB1LQ9C091 1923 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 C6orf229H3BNL8 230 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 GCOM1H8Y6P7 765 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 MEIS1O00470 390 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 CALUO43852 315 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 MYZAPP0CAP1 466 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 HPDP32754 393 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 JAM2P57087 298 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 MOXD1Q6UVY6 613 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 PEX26Q7Z412 305 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 SLFN11Q7Z7L1 901 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 OTUD6BQ8N6M0 293 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 SYT2Q8N9I0 419 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 OR2W6PQ8NHA6 318 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 NEUROG2Q9H2A3 272 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 CENPHQ9H3R5 247 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms