RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 DNAJC6O75061 913 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 CYP2C19P33261 490 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 CDR2Q01850 454 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 DNAJC24Q6P3W2 148 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 CCNYQ8ND76 341 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 ANO3Q9BYT9 981 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 CXorf56Q9H5V9 222 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 SPC25Q9HBM1 224 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 MLXIPLQ9NP71 852 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 PCDHA1Q9Y5I3 950 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 ESYT3A0FGR9 886 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 KRT37O76014 449 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 S100BP04271 92 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 IFNAR1P17181 557 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 SULF1Q8IWU6 871 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 METTL13Q8N6R0 699 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 TTC1Q99614 292 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 UBE2TQ9NPD8 197 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 PNMA2Q9UL42 364 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 GOLGA8CPA6NN73 597 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 TRIM66O15016 1216 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 OCRLQ01968 901 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 IQCB1Q15051 598 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 COG1Q8WTW3 980 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 DCPSQ96C86 337 aaKnown RBP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 CHMP6Q96FZ7 201 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 CFAP36Q96G28 342 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 ATP6V1G3Q96LB4 118 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 ECT2Q9H8V3 914 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 SAYSD1Q9NPB0 183 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 EMILIN3Q9NT22 766 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 SRGAP2BP0DMP2 458 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 PGBD1Q96JS3 809 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 NUDCD1Q96RS6 583 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 COPEO14579 308 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 FOSP01100 380 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 OATP04181 439 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 BCAMP50895 628 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 DOK7Q18PE1 504 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 PPP1R2P3Q6NXS1 205 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 RGS9BPQ6ZS82 235 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 KIAA0825Q8IV33 1275 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 SKA2Q8WVK7 121 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 NDE1Q9NXR1 346 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 SUFUQ9UMX1 484 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 APOBEC2Q9Y235 224 aaKnown RBP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 MRPL11Q9Y3B7 192 aaKnown RBP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 A2ML1A8K2U0 1454 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 ERVV-1B6SEH8 477 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 PYGBP11216 843 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 USP14P54578 494 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 EPHB1P54762 984 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 C4orf50Q6ZRC1 276 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 EPM2AIP1Q7L775 607 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 KRT26Q7Z3Y9 468 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 SESTD1Q86VW0 696 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 RHOT2Q8IXI1 618 aa14.28□□□□□ -0.12
TCOF1-214ENST00000515035 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.28□□□□□ -0.12
TCOF1-214ENST00000515035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.27□□□□□ -0.12
TCOF1-214ENST00000515035 MEFVO15553 781 aaPredicted RBP14.27□□□□□ -0.12
TCOF1-214ENST00000515035 AP2B1P63010 937 aa14.27□□□□□ -0.12
TCOF1-214ENST00000515035 CIAO1O76071 339 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 PDE8BO95263 885 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 HSPA4LO95757 839 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 SYF2O95926 243 aaKnown RBP14.27□□□□□ -0.13
TCOF1-214ENST00000515035 LRRC63Q05C16 580 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 NR1H3Q13133 447 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 FBXL13Q8NEE6 735 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 STAMBPL1Q96FJ0 436 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 FAM161BQ96MY7 647 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 ADPGKQ9BRR6 497 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 SUGCTQ9HAC7 445 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 WDR70Q9NW82 654 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 TET3O43151 1660 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 ERCC6L2Q5T890 1561 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 NVLO15381 856 aaKnown RBP14.27□□□□□ -0.13
TCOF1-214ENST00000515035 IRX1P78414 480 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-214ENST00000515035 ANO5Q75V66 913 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 ING2Q9H160 280 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 GREM2Q9H772 168 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 DCTN4Q9UJW0 460 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 PLCG1P19174 1290 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 POLA2Q14181 598 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 CCDC92Q53HC0 331 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-214ENST00000515035 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 DEPDC1BQ8WUY9 529 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 AIFM3Q96NN9 605 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 MAGED2Q9UNF1 606 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-214ENST00000515035 ADGRG1Q9Y653 693 aa14.27□□□□□ -0.13
TCOF1-214ENST00000515035 ALAS1P13196 640 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 BRAFP15056 766 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 FBXW10Q5XX13 1052 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 CC2D2BQ6DHV5 1058 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 TBCKQ8TEA7 893 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 FAM81BQ96LP2 452 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 TRIM15Q9C019 465 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
TCOF1-214ENST00000515035 MXI1P50539 228 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 PSMD2Q13200 908 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms