RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 FOXRED1Q96CU9 486 aaPredicted RBP6.64□□□□□ -1.35
RFC1-216ENST00000514572 CARS2Q9HA77 564 aaKnown RBP6.64□□□□□ -1.35
RFC1-216ENST00000514572 C1orf112Q9NSG2 853 aa6.64□□□□□ -1.35
RFC1-216ENST00000514572 ASH2LQ9UBL3 628 aa6.64□□□□□ -1.35
RFC1-216ENST00000514572 RCAN3Q9UKA8 241 aa6.64□□□□□ -1.35
RFC1-216ENST00000514572 PPP2R3BQ9Y5P8 575 aa6.64□□□□□ -1.35
RFC1-216ENST00000514572 A6NNZ2 444 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 HGSO14964 777 aaPredicted RBP6.63□□□□□ -1.35
RFC1-216ENST00000514572 SLC27A2O14975 620 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 NRDCO43847 1150 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 NTRK1P04629 796 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 HSPA6P17066 643 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 HOXA10P31260 410 aaPredicted RBP6.63□□□□□ -1.35
RFC1-216ENST00000514572 HTR3AP46098 478 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 USP14P54578 494 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 TUSC3Q13454 348 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 DOC2BQ14184 412 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 TMEM132BQ14DG7 1078 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 BRD3Q15059 726 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 RALGPS1Q5JS13 557 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 ATAT1Q5SQI0 421 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 NME9Q86XW9 330 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 RBM12BQ8IXT5 1001 aaKnown RBP6.63□□□□□ -1.35
RFC1-216ENST00000514572 ANKS4BQ8N8V4 417 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 TTLL11Q8NHH1 800 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 IL17RAQ96F46 866 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 LRGUKQ96M69 825 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 PLCD4Q9BRC7 762 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 ADAMTS10Q9H324 1103 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 DNAJC28Q9NX36 388 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 MYOTQ9UBF9 498 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 TUBD1Q9UJT1 453 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 TMPRSS11EQ9UL52 423 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 DNM3Q9UQ16 869 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 NUB1Q9Y5A7 615 aa6.63□□□□□ -1.35
RFC1-216ENST00000514572 FRMPD2Q68DX3 1309 aaPredicted RBP6.62□□□□□ -1.35
RFC1-216ENST00000514572 ACOT7O00154 380 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 IFRD1O00458 451 aaPredicted RBP6.62□□□□□ -1.35
RFC1-216ENST00000514572 ELL2O00472 640 aaPredicted RBP6.62□□□□□ -1.35
RFC1-216ENST00000514572 APAF1O14727 1248 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 MAFKO60675 156 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 HERVK_113P62684 666 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 MRPS9P82933 396 aaKnown RBP6.62□□□□□ -1.35
RFC1-216ENST00000514572 ADCY1Q08828 1119 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 OS9Q13438 667 aaPredicted RBP6.62□□□□□ -1.35
RFC1-216ENST00000514572 MORC3Q14149 939 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 KIR3DS1Q14943 382 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 CLUL1Q15846 466 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 ARHGAP29Q52LW3 1261 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 PITRM1Q5JRX3 1037 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 NKAPLQ5M9Q1 402 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 ZBTB41Q5SVQ8 909 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 IFIT1BQ5T764 474 aaKnown RBP6.62□□□□□ -1.35
RFC1-216ENST00000514572 LILRA6Q6PI73 481 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 TTLL7Q6ZT98 887 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 CEP128Q6ZU80 1094 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 NETO2Q8NC67 525 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 CLEC4DQ8WXI8 215 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 HPS3Q969F9 1004 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 TTC17Q96AE7 1141 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 ALPK1Q96QP1 1244 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 CSRNP2Q9H175 543 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 WNT8AQ9H1J5 351 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 SERPINB13Q9UIV8 391 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 TMEM59LQ9UK28 342 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 TAF6LQ9Y6J9 622 aa6.62□□□□□ -1.35
RFC1-216ENST00000514572 TCRBV5S2A0A599 114 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 FOXP2O15409 715 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 SGSM2O43147 1006 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 CREB3O43889 395 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 POU2F2P09086 479 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 TACR1P25103 407 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 CD96P40200 585 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 ZNF280AP59817 542 aaPredicted RBP6.61□□□□□ -1.35
RFC1-216ENST00000514572 CHRNEQ04844 493 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 IKZF1Q13422 519 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 ZNF267Q14586 743 aaPredicted RBP6.61□□□□□ -1.35
RFC1-216ENST00000514572 ACAP2Q15057 778 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 NR0B2Q15466 257 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.61□□□□□ -1.35
RFC1-216ENST00000514572 C4orf46Q504U0 113 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 TOR2AQ5JU69 321 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 BTBD8Q5XKL5 378 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 IL31Q6EBC2 164 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 GALNT18Q6P9A2 607 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 DCP2Q8IU60 420 aaKnown RBP6.61□□□□□ -1.35
RFC1-216ENST00000514572 LYSMD2Q8IV50 215 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 SPICE1Q8N0Z3 855 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 ASB15Q8WXK1 588 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 SEC14L1Q92503 715 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 GTPBP4Q9BZE4 634 aaKnown RBP6.61□□□□□ -1.35
RFC1-216ENST00000514572 PRDM12Q9H4Q4 367 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 MAN1C1Q9NR34 630 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 USP25Q9UHP3 1055 aa6.61□□□□□ -1.35
RFC1-216ENST00000514572 SRGAP3O43295 1099 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 AP1G1O43747 822 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 NDUFS2O75306 463 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 OFD1O75665 1012 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 HRGP04196 525 aa6.6□□□□□ -1.35
RFC1-216ENST00000514572 MMEP08473 750 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms