RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MIS18BP1Q6P0N0 1132 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 TSHZ1Q6ZSZ6 1077 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 SMAP1Q8IYB5 467 aaPredicted RBP11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 FAM177A1Q8N128 213 aaPredicted RBP11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 MICALL1Q8N3F8 863 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 DAGLBQ8NCG7 672 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 ATP8B4Q8TF62 1192 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 GDPD5Q8WTR4 605 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 ATXN2LQ8WWM7 1075 aaKnown RBP11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 TGS1Q96RS0 853 aaKnown RBP11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 LARP6Q9BRS8 491 aaKnown RBP11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 FAM49AQ9H0Q0 323 aaPredicted RBP11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 ZNF302Q9NR11 478 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 PCDHA2Q9Y5H9 948 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 COL1A2P08123 1366 aa11.87□□□□□ -0.51
HMGXB3-205ENST00000514469 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 MUC3AQ02505 3323 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 ZBTB42B2RXF5 422 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 HBP1O60381 514 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 ATP4AP20648 1035 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 NLRP5P59047 1200 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 KRT76Q01546 638 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 STK3Q13188 491 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 NPY5RQ15761 445 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 KRT40Q6A162 431 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 CPLX2Q6PUV4 134 aaKnown RBP11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 MTHFD1LQ6UB35 978 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 UIMC1Q96RL1 719 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 RC3H2Q9HBD1 1191 aaKnown RBP11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 MTUS1Q9ULD2 1270 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 PCDHA4Q9UN74 947 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 MAFBQ9Y5Q3 323 aaPredicted RBP11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 TRPV2Q9Y5S1 764 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 SQORQ9Y6N5 450 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 CUL9Q8IWT3 2517 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 KDM3AQ9Y4C1 1321 aa11.86□□□□□ -0.51
HMGXB3-205ENST00000514469 MSH4O15457 936 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 USP11P51784 963 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 SCRN1Q12765 414 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 ZNF484Q5JVG2 852 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 IER5Q5VY09 327 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 SWSAP1Q6NVH7 229 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 PDXDC2PQ6P474 469 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 BLIDQ8IZY5 108 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 NME8Q8N427 588 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 TBCKQ8TEA7 893 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 LINC01599Q8WXQ3 324 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 ASB2Q96Q27 587 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 YME1L1Q96TA2 773 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 C22orf23Q9BZE7 217 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 AGO3Q9H9G7 860 aaKnown RBP11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 SUGCTQ9HAC7 445 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 LMCD1Q9NZU5 365 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 TCEAL9Q9UHQ7 104 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 PCDHA10Q9Y5I2 948 aa11.85□□□□□ -0.51
HMGXB3-205ENST00000514469 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 M0QZ92 97 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 PFKFB2O60825 505 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 CDKL5O76039 1030 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 UPP2O95045 317 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 C22orf31O95567 290 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 PSAPP07602 524 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 KLRC1P26715 233 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 CD52P31358 61 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 MRPS5P82675 430 aaKnown RBP11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 TMEM62Q0P6H9 643 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 Q4G0T1 1027 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 GALNT17Q6IS24 598 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 SLC5A5Q92911 643 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 RIT2Q99578 217 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 CELF4Q9BZC1 486 aaKnown RBP11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 TPCN1Q9ULQ1 816 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 ADGRA3Q8IWK6 1321 aa11.84□□□□□ -0.51
HMGXB3-205ENST00000514469 CYP3A7-CYP3A51PA0A087WV96 503 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 ENPP3O14638 875 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 LINC00271P0C7V0 271 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 CYP3A7P24462 503 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 PAK2Q13177 524 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 EPC2Q52LR7 807 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 LRCH2Q5VUJ6 765 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 MOXD1Q6UVY6 613 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 KIAA0319LQ8IZA0 1049 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 CRIPAKQ8N1N5 446 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 MBOAT7Q96N66 472 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 PHF20Q9BVI0 1012 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 FTHL17Q9BXU8 183 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 SLKQ9H2G2 1235 aaPredicted RBP11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 GABBR1Q9UBS5 961 aa11.83□□□□□ -0.52
HMGXB3-205ENST00000514469 PADI3Q9ULW8 664 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms