RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	BOC	Q9BWV1	1114 aa		6.22	□□□□□ -1.41
MATR3-223	ENST00000514402	SCD	O00767	359 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	MECP2	P51608	486 aa	Known RBP	6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	PPP2CB	P62714	309 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	PPP2CA	P67775	309 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	ABHD17C	Q6PCB6	329 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	ARHGEF18	Q6ZSZ5	1173 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	WNK4	Q96J92	1243 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	SAMD11	Q96NU1	681 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	BTBD2	Q9BX70	525 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	KRTAP4-5	Q9BYR2	181 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	PIF1	Q9H611	641 aa		6.21	□□□□□ -1.42
MATR3-223	ENST00000514402	FOXP2	O15409	715 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	OPA1	O60313	960 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	MAF	O75444	373 aa	Predicted RBP	6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	DNAJC8	O75937	253 aa	Predicted RBP	6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	ASMTL	O95671	621 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	CSF2RB	P32927	897 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	BUD31	P41223	144 aa	Predicted RBP	6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	FNTB	P49356	437 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	IRF9	Q00978	393 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	TOP3A	Q13472	1001 aa	Predicted RBP	6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	ZNF827	Q17R98	1081 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	PHF19	Q5T6S3	580 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	CPZ	Q66K79	652 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	SLFN13	Q68D06	897 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	IFNL2	Q8IZJ0	200 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	CHST14	Q8NCH0	376 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	BORCS6	Q96GS4	357 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	RNPC3	Q96LT9	517 aa	Known RBP	6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	SEC61A2	Q9H9S3	476 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	SAMD15	Q9P1V8	674 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	MAGEC2	Q9UBF1	373 aa	Predicted RBP	6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	ZDHHC9	Q9Y397	364 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	SLC4A7	Q9Y6M7	1214 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	ZNF536	O15090	1300 aa		6.2	□□□□□ -1.42
MATR3-223	ENST00000514402	KCNK3	O14649	394 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	MPIG6B	O95866	241 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	ZBTB48	P10074	688 aa	Predicted RBP	6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	ETV4	P43268	484 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	USP10	Q14694	798 aa	Known RBP	6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	SEC23A	Q15436	765 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	GLB1L	Q6UWU2	654 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	UBE2R2	Q712K3	238 aa	Predicted RBP	6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	WDR48	Q8TAF3	677 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	CALML6	Q8TD86	181 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	ASB15	Q8WXK1	588 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	APPBP2	Q92624	585 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	E2F7	Q96AV8	911 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	SCYL1	Q96KG9	808 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	ORAI3	Q9BRQ5	295 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	CARD11	Q9BXL7	1154 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	KANSL2	Q9H9L4	492 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	MSL2	Q9HCI7	577 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	CABP5	Q9NP86	173 aa		6.19	□□□□□ -1.42
MATR3-223	ENST00000514402	ESYT3	A0FGR9	886 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402		M0R2C6	588 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	MME	P08473	750 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	ADRB1	P08588	477 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	ECE1	P42892	770 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	IL13RA1	P78552	427 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	WDR72	Q3MJ13	1102 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	ZNF568	Q3ZCX4	644 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	ZMAT1	Q5H9K5	638 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	C16orf86	Q6ZW13	317 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	GBP4	Q96PP9	640 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	OR10A5	Q9H207	317 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	ACSS2	Q9NR19	701 aa		6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	TNPO3	Q9Y5L0	923 aa	Known RBP	6.18	□□□□□ -1.42
MATR3-223	ENST00000514402	GOLGA6L22	H0YM25	854 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	PPP1R12A	O14974	1030 aa	Predicted RBP	6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	B4GALT4	O60513	344 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	GLRX3	O76003	335 aa	Known RBP	6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	MC4R	P32245	332 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	MAGEA10	P43363	369 aa	Predicted RBP	6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	RANGAP1	P46060	587 aa	Predicted RBP	6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	TM4SF20	Q53R12	229 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	HIPK4	Q8NE63	616 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	FOXB1	Q99853	325 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	AMN	Q9BXJ7	453 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	ZDHHC5	Q9C0B5	715 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	PPP4R1L	Q9P1A2	415 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	B4GALT6	Q9UBX8	382 aa		6.17	□□□□□ -1.42
MATR3-223	ENST00000514402	NPEPPSL1	A6NEC2	478 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	RASSF10	A6NK89	507 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	CYP17A1	P05093	508 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	POU3F2	P20265	443 aa	Predicted RBP	6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	TMEM132B	Q14DG7	1078 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	EIF4H	Q15056	248 aa	Known RBP	6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	CATSPERE	Q5SY80	951 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	KANK2	Q63ZY3	851 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	TMEM200B	Q69YZ2	307 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	FSTL4	Q6MZW2	842 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	KIF18B	Q86Y91	864 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	C1QTNF3	Q9BXJ4	246 aa		6.16	□□□□□ -1.42
MATR3-223	ENST00000514402	UCKL1	Q9NWZ5	548 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms