RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 KRT76Q01546 638 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 MTF1Q14872 753 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 LBX2Q6XYB7 198 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 PRRT2Q7Z6L0 340 aaPredicted RBP16.52■□□□□ 0.23
VCAN-211ENST00000513984 ERO1BQ86YB8 467 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 CHST13Q8NET6 341 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 MRPL44Q9H9J2 332 aaKnown RBP16.52■□□□□ 0.23
VCAN-211ENST00000513984 PARVGQ9HBI0 331 aa16.52■□□□□ 0.23
VCAN-211ENST00000513984 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.23
VCAN-211ENST00000513984 LRRC37A2A6NM11 1700 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 A0A1W2PQJ5 194 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 ARHGEF35A5YM69 484 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 ATP9AO75110 1047 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 STAM2O75886 525 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 SFNP31947 248 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 QARSP47897 775 aaKnown RBP16.51■□□□□ 0.23
VCAN-211ENST00000513984 ERVK-24P63145 666 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 PLS1Q14651 629 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 CYP26C1Q6V0L0 522 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 NLRX1Q86UT6 975 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 RDM1Q8NG50 284 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 OR8K1Q8NGG5 319 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 ELP3Q9H9T3 547 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 SIK3Q9Y2K2 1263 aa16.51■□□□□ 0.23
VCAN-211ENST00000513984 UBE4BO95155 1302 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 SPDYE5A6NIY4 337 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 WDR64B1ANS9 1081 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 CXCL11O14625 94 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 RIOK3O14730 519 aaKnown RBP16.5■□□□□ 0.23
VCAN-211ENST00000513984 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
VCAN-211ENST00000513984 CCDC40Q4G0X9 1142 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 TRIM59Q8IWR1 403 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 KIF18AQ8NI77 898 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 FIZ1Q96SL8 496 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 SENP7Q9BQF6 1050 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
VCAN-211ENST00000513984 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
VCAN-211ENST00000513984 IRF6O14896 467 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 CETN3O15182 167 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 CALUO43852 315 aaPredicted RBP16.49■□□□□ 0.23
VCAN-211ENST00000513984 PRPF6O94906 941 aaKnown RBP16.49■□□□□ 0.23
VCAN-211ENST00000513984 GCNT3O95395 438 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 CCNE2O96020 404 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 CCDC175P0C221 793 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 KLK7P49862 253 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 ETF1P62495 437 aaKnown RBP16.49■□□□□ 0.23
VCAN-211ENST00000513984 ZBED6P86452 979 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 ADAM9Q13443 819 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 ZNF746Q6NUN9 644 aaPredicted RBP16.49■□□□□ 0.23
VCAN-211ENST00000513984 TRIM65Q6PJ69 517 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 C4orf19Q8IY42 314 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 ZNF592Q92610 1267 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 CLMNQ96JQ2 1002 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 BCAS3Q9H6U6 928 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 KCNH4Q9UQ05 1017 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 SAMM50Q9Y512 469 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 ASTN1O14525 1302 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 GLTPD2A6NH11 291 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 RGS20O76081 388 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 NR2F2P24468 414 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 MAPK7Q13164 816 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 MEA1Q16626 185 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 PADI6Q6TGC4 694 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 GADL1Q6ZQY3 521 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 RIOX2Q8IUF8 465 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 DESI2Q9BSY9 194 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 TCEAL9Q9UHQ7 104 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 ZMYM2Q9UBW7 1377 aa16.49■□□□□ 0.23
VCAN-211ENST00000513984 PFASO15067 1338 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 NFASCO94856 1347 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 SFI1A8K8P3 1242 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 KCNA2P16389 499 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 RARRES1P49788 294 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 PSMC5P62195 406 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 PPIL2Q13356 520 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 NFIL3Q16649 462 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 DAW1Q8N136 415 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 DNERQ8NFT8 737 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 IWS1Q96ST2 819 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 POLD4Q9HCU8 107 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
VCAN-211ENST00000513984 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 FAM184BQ9ULE4 1060 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 ZNFX1Q9P2E3 1918 aaKnown RBP16.48■□□□□ 0.23
VCAN-211ENST00000513984 PHLPP2Q6ZVD8 1323 aa16.48■□□□□ 0.23
VCAN-211ENST00000513984 HIP1RO75146 1068 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 NMT1P30419 496 aaKnown RBP16.47■□□□□ 0.23
VCAN-211ENST00000513984 UGCGQ16739 394 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 WDR59Q6PJI9 974 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 ZNF720Q7Z2F6 126 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 FAM178BQ8IXR5 827 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
VCAN-211ENST00000513984 DYNC1I1O14576 645 aa16.47■□□□□ 0.23
VCAN-211ENST00000513984 YWHABP31946 246 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms