RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ERCC4Q92889 916 aaPredicted RBP11.02□□□□□ -0.65
TPM3-221ENST00000513769 MRFAP1L1Q96HT8 127 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 EIF2AK1Q9BQI3 630 aaKnown RBP11.02□□□□□ -0.65
TPM3-221ENST00000513769 HOMER2Q9NSB8 354 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 RWDD2AQ9UIY3 292 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 NFASCO94856 1347 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 PAPPA2Q9BXP8 1791 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 PARP14Q460N5 1801 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 MANSC4A6NHS7 340 aaPredicted RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 GOLGA6L6A8MZA4 724 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 TRAF5O00463 557 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 NRG2O14511 850 aaPredicted RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 KLRC4O43908 158 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 ADCY5O95622 1261 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 PLA2G4BP0C869 781 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 FCER1AP12319 257 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 CDC25BP30305 580 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 JAK3P52333 1124 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 NCAPHQ15003 741 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 ZNF746Q6NUN9 644 aaPredicted RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 C11orf57Q6ZUT1 292 aaPredicted RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 CCDC65Q8IXS2 484 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 SMAP1Q8IYB5 467 aaPredicted RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 CCDC102AQ96A19 550 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 TRIM44Q96DX7 344 aaPredicted RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 HHIPL1Q96JK4 782 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 CTAGE1Q96RT6 745 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 NUDT12Q9BQG2 462 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 MOV10L1Q9BXT6 1211 aaKnown RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 ZSWIM4Q9H7M6 989 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 MORF4L1Q9UBU8 362 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 TCEAL9Q9UHQ7 104 aa11.01□□□□□ -0.65
TPM3-221ENST00000513769 DIS3Q9Y2L1 958 aaKnown RBP11.01□□□□□ -0.65
TPM3-221ENST00000513769 DNAJC25-GNG10A0A024R161 153 aa11□□□□□ -0.65
TPM3-221ENST00000513769 BICDL2A1A5D9 508 aa11□□□□□ -0.65
TPM3-221ENST00000513769 PDHXO00330 501 aa11□□□□□ -0.65
TPM3-221ENST00000513769 CBFA2T2O43439 604 aa11□□□□□ -0.65
TPM3-221ENST00000513769 AOC2O75106 756 aa11□□□□□ -0.65
TPM3-221ENST00000513769 MED24O75448 989 aa11□□□□□ -0.65
TPM3-221ENST00000513769 CNMDO75829 334 aa11□□□□□ -0.65
TPM3-221ENST00000513769 FGFR1OPO95684 399 aaKnown RBP11□□□□□ -0.65
TPM3-221ENST00000513769 MYCLP12524 364 aaPredicted RBP11□□□□□ -0.65
TPM3-221ENST00000513769 ERCC3P19447 782 aa11□□□□□ -0.65
TPM3-221ENST00000513769 EDNRBP24530 442 aa11□□□□□ -0.65
TPM3-221ENST00000513769 GJA5P36382 358 aa11□□□□□ -0.65
TPM3-221ENST00000513769 MAP2K2P36507 400 aa11□□□□□ -0.65
TPM3-221ENST00000513769 SLC12A3P55017 1021 aa11□□□□□ -0.65
TPM3-221ENST00000513769 ERVK-9P63128 1117 aa11□□□□□ -0.65
TPM3-221ENST00000513769 ERVK-24P63145 666 aa11□□□□□ -0.65
TPM3-221ENST00000513769 KCTD2Q14681 263 aa11□□□□□ -0.65
TPM3-221ENST00000513769 Q3C1V9 767 aa11□□□□□ -0.65
TPM3-221ENST00000513769 ISM2Q6H9L7 571 aa11□□□□□ -0.65
TPM3-221ENST00000513769 NCAPH2Q6IBW4 605 aa11□□□□□ -0.65
TPM3-221ENST00000513769 NCAPG2Q86XI2 1143 aa11□□□□□ -0.65
TPM3-221ENST00000513769 C4orf19Q8IY42 314 aa11□□□□□ -0.65
TPM3-221ENST00000513769 ADSSL1Q8N142 457 aa11□□□□□ -0.65
TPM3-221ENST00000513769 FAM133AQ8N9E0 248 aa11□□□□□ -0.65
TPM3-221ENST00000513769 ANKLE1Q8NAG6 615 aa11□□□□□ -0.65
TPM3-221ENST00000513769 MORC4Q8TE76 937 aa11□□□□□ -0.65
TPM3-221ENST00000513769 NOC3LQ8WTT2 800 aaKnown RBP11□□□□□ -0.65
TPM3-221ENST00000513769 TIPINQ9BVW5 301 aa11□□□□□ -0.65
TPM3-221ENST00000513769 TRIM5Q9C035 493 aa11□□□□□ -0.65
TPM3-221ENST00000513769 BLZF1Q9H2G9 400 aa11□□□□□ -0.65
TPM3-221ENST00000513769 ZNF408Q9H9D4 720 aa11□□□□□ -0.65
TPM3-221ENST00000513769 DBR1Q9UK59 544 aaKnown RBP11□□□□□ -0.65
TPM3-221ENST00000513769 PCDHA10Q9Y5I2 948 aa11□□□□□ -0.65
TPM3-221ENST00000513769 TLL2Q9Y6L7 1015 aa11□□□□□ -0.65
TPM3-221ENST00000513769 CCL15-CCL14A0A0B4J2E2 113 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 MYMKA6NI61 221 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 ASB14A6NK59 587 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 PSMA7O14818 248 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 ATG7O95352 703 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 EIF2AK2P19525 551 aaKnown RBP10.99□□□□□ -0.65
TPM3-221ENST00000513769 CDK11BP21127 795 aaKnown RBP10.99□□□□□ -0.65
TPM3-221ENST00000513769 SLC19A1P41440 591 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 QARSP47897 775 aaKnown RBP10.99□□□□□ -0.65
TPM3-221ENST00000513769 EHHADHQ08426 723 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 PDE4DQ08499 809 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 IRF5Q13568 498 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 NEDD9Q14511 834 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 MCM6Q14566 821 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 ECM1Q16610 540 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 CCL15Q16663 113 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 SLC30A10Q6XR72 485 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 OTUD6AQ7L8S5 288 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 MIER3Q7Z3K6 550 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 TPH2Q8IWU9 490 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 GRAMD1CQ8IYS0 662 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 GUF1Q8N442 669 aaKnown RBP10.99□□□□□ -0.65
TPM3-221ENST00000513769 STAMQ92783 540 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 EMID1Q96A84 441 aaPredicted RBP10.99□□□□□ -0.65
TPM3-221ENST00000513769 DNAJC19Q96DA6 116 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 PLIN2Q99541 437 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 ANKEF1Q9NU02 776 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 EXOC1Q9NV70 894 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 IMPACTQ9P2X3 320 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 PTPRFP10586 1907 aa10.99□□□□□ -0.65
TPM3-221ENST00000513769 LOC285556D6RIA3 1793 aa10.98□□□□□ -0.65
TPM3-221ENST00000513769 FRMD3A2A2Y4 597 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms