RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 HERVK_113P62684 666 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SEPT2Q15019 361 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 PTGISQ16647 500 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 LGSNQ5TDP6 509 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 TTBK2Q6IQ55 1244 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 MMGT1Q8N4V1 131 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 CCHCR1Q8TD31 782 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 PRMT1Q99873 361 aaKnown RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 EHD4Q9H223 541 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 TMEM60Q9H2L4 133 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 WDR17Q8IZU2 1322 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 SORBS3O60504 671 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 PDS5AQ29RF7 1337 aaKnown RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 BBOF1Q8ND07 529 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 TBC1D22AQ8WUA7 517 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 CARD10Q9BWT7 1032 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 BARHL2Q9NY43 387 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 COMMD10Q9Y6G5 202 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 XDHP47989 1333 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 MKRN4PQ13434 485 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 ZNF746Q6NUN9 644 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 GLYCTKQ8IVS8 523 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 PIGOQ8TEQ8 1089 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 C8orf37Q96NL8 207 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 MTA3Q9BTC8 594 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 DDX23Q9BUQ8 820 aaKnown RBP8.38□□□□□ -1.07
CLCN3-209ENST00000513761 ANAPC4Q9UJX5 808 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 RAB21Q9UL25 225 aa8.38□□□□□ -1.07
CLCN3-209ENST00000513761 TTLL1O95922 423 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 ARL1P40616 181 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 TBX2Q13207 712 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 CTTNQ14247 550 aaKnown RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 XKR9Q5GH70 373 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 GBP7Q8N8V2 638 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 ETNK1Q9HBU6 452 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 ACTN1P12814 892 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 CHN1P15882 459 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 MFAP3P55082 362 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 YWHAGP61981 247 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 ICA1Q05084 483 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 TSC22D3Q99576 134 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 AGXT2Q9BYV1 514 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 DNAI2Q9GZS0 605 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 SCOCQ9UIL1 159 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 SHPRHQ149N8 1683 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 ERVV-1B6SEH8 477 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 PODXLO00592 558 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 NR3C1P04150 777 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 KLRC1P26715 233 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 SERPINB6P35237 376 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 SLC18A3Q16572 532 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 GNPTABQ3T906 1256 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 CERKLQ49MI3 558 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 GIMAP8Q8ND71 665 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 MDM1Q8TC05 714 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 HOOK2Q96ED9 719 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 TMOD4Q9NZQ9 345 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 FAM107AO95990 144 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 KRT19P08727 400 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 GPATCH4Q5T3I0 446 aaKnown RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 PPP4R3CPQ6ZMV5 832 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 NT5C1BQ96P26 610 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 LBHD1Q9BQE6 289 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 AMNQ9BXJ7 453 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 HEMGNQ9BXL5 484 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 CELF4Q9BZC1 486 aaKnown RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 CCSER1Q9C0I3 900 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 VIRMAQ69YN4 1812 aaKnown RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 NPHP3-ACAD11A0A0J9YXS1 232 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 POTEFA5A3E0 1075 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 RASA4BC9J798 803 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 RASA4O43374 803 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 EVI5O60447 810 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 POTEIP0CG38 1075 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 BRAFP15056 766 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 DYNLT1P63172 113 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 HP1BP3Q5SSJ5 553 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 USP17L6PQ6QN14 398 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 POTEGQ6S5H5 508 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 POTEEQ6S8J3 1075 aa8.37□□□□□ -1.07
CLCN3-209ENST00000513761 ELOA2Q8IYF1 753 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-209ENST00000513761 PNPLA7Q6ZV29 1317 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 MAPK13O15264 365 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 DIAPH2O60879 1101 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 GAP43P17677 238 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 HOXA13P31271 388 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 STAT3P40763 770 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 DOK7Q18PE1 504 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 CDKAL1Q5VV42 579 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms