RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 LRCH2Q5VUJ6 765 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 FAM117BQ6P1L5 589 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.66■□□□□ 0.58
DDX41-213ENST00000512027 SPRED2Q7Z698 418 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 FAM177A1Q8N128 213 aaPredicted RBP18.66■□□□□ 0.58
DDX41-213ENST00000512027 UNC45AQ9H3U1 944 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 PRDM12Q9H4Q4 367 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 SLC28A3Q9HAS3 691 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 GABBR1Q9UBS5 961 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 TCEAL9Q9UHQ7 104 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 LIMCH1Q9UPQ0 1083 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 PCDHA11Q9Y5I1 949 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 CYP3A7-CYP3A51PA0A087WV96 503 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 RRN3P2A6NIE6 340 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 GAS7O60861 476 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 CAND2O75155 1236 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 PSAPP07602 524 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 GHRP10912 638 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 CYP3A7P24462 503 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 IKBKEQ14164 716 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 UGCGQ16739 394 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 PLEKHG4Q58EX7 1191 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 FAM26DQ5JW98 314 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 PPP2R2DQ66LE6 453 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 TAF2Q6P1X5 1199 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 CKAP2LQ8IYA6 745 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 ATP8B4Q8TF62 1192 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 WASF1Q92558 559 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 MBOAT7Q96N66 472 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 TEKT3Q9BXF9 490 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 PCDHA10Q9Y5I2 948 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 CDY2AQ9Y6F7 541 aa18.65■□□□□ 0.58
DDX41-213ENST00000512027 ABHD14A-ACY1A0A1B0GW23 586 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 LCHNA4D1U4 455 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 WDR64B1ANS9 1081 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 ZBTB42B2RXF5 422 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 PSMD10O75832 226 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 FOSL2P15408 326 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 KRT2P35908 639 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 RBM25P49756 843 aaKnown RBP18.64■□□□□ 0.57
DDX41-213ENST00000512027 MKRN4PQ13434 485 aaPredicted RBP18.64■□□□□ 0.57
DDX41-213ENST00000512027 MTHFD1LQ6UB35 978 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 NEK8Q86SG6 692 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 SMAP1Q8IYB5 467 aaPredicted RBP18.64■□□□□ 0.57
DDX41-213ENST00000512027 ETNPPLQ8TBG4 499 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 PHOSPHO2Q8TCD6 241 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 TNFRSF25Q93038 417 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 CERS4Q9HA82 394 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 DISC1Q9NRI5 854 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 DDX25Q9UHL0 483 aaKnown RBP18.64■□□□□ 0.57
DDX41-213ENST00000512027 MAFBQ9Y5Q3 323 aaPredicted RBP18.64■□□□□ 0.57
DDX41-213ENST00000512027 IGSF9BQ9UPX0 1349 aa18.64■□□□□ 0.57
DDX41-213ENST00000512027 COL4A4P53420 1690 aaPredicted RBP18.63■□□□□ 0.57
DDX41-213ENST00000512027 ZNF862O60290 1169 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 HBP1O60381 514 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 KLRC1P26715 233 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 SLC26A2P50443 739 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 MRPS6P82932 125 aaKnown RBP18.63■□□□□ 0.57
DDX41-213ENST00000512027 GUCY1B3Q02153 619 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 LPIN1Q14693 890 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 KRT40Q6A162 431 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 RPAINQ86UA6 219 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 SEPT8Q92599 483 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 RIT2Q99578 217 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 PRUNE2Q8WUY3 3088 aa18.63■□□□□ 0.57
DDX41-213ENST00000512027 REV3LO60673 3130 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 UNC80Q8N2C7 3258 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 TLL1O43897 1013 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 CCNT1O60563 726 aaKnown RBP18.62■□□□□ 0.57
DDX41-213ENST00000512027 MMP1P03956 469 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 MOXD1Q6UVY6 613 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 MIER3Q7Z3K6 550 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 RSPH3Q86UC2 560 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 MYOCDQ8IZQ8 938 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 PPP1R16BQ96T49 567 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 ZBED2Q9BTP6 218 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 IFIH1Q9BYX4 1025 aaKnown RBP18.62■□□□□ 0.57
DDX41-213ENST00000512027 PCDHA2Q9Y5H9 948 aa18.62■□□□□ 0.57
DDX41-213ENST00000512027 COL1A2P08123 1366 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.61■□□□□ 0.57
DDX41-213ENST00000512027 BTBD18B2RXH4 712 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 RFXAPO00287 272 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 WNT7AO00755 349 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 C22orf31O95567 290 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 PRKCEQ02156 737 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 ADGRE1Q14246 886 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 FBXO47Q5MNV8 452 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 B3GNT9Q6UX72 402 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
DDX41-213ENST00000512027 DIS3L2Q8IYB7 885 aaKnown RBP18.61■□□□□ 0.57
DDX41-213ENST00000512027 MAFAQ8NHW3 353 aaPredicted RBP18.61■□□□□ 0.57
DDX41-213ENST00000512027 BBXQ8WY36 941 aaPredicted RBP18.61■□□□□ 0.57
DDX41-213ENST00000512027 TNPO1Q92973 898 aaKnown RBP18.61■□□□□ 0.57
DDX41-213ENST00000512027 AGO3Q9H9G7 860 aaKnown RBP18.61■□□□□ 0.57
DDX41-213ENST00000512027 SMIM35A0A1B0GVV1 85 aa18.6■□□□□ 0.57
DDX41-213ENST00000512027 TMEM150BA6NC51 233 aa18.6■□□□□ 0.57
DDX41-213ENST00000512027 EPOPA6NHQ4 379 aa18.6■□□□□ 0.57
DDX41-213ENST00000512027 GJB5O95377 273 aa18.6■□□□□ 0.57
DDX41-213ENST00000512027 CD52P31358 61 aa18.6■□□□□ 0.57
DDX41-213ENST00000512027 JAK3P52333 1124 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms