RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 FAM43BQ6ZT52 329 aaPredicted RBP9.51□□□□□ -0.89
TRIO-217ENST00000511019 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
TRIO-217ENST00000511019 NPAS4Q8IUM7 802 aa9.51□□□□□ -0.89
TRIO-217ENST00000511019 CMTR2Q8IYT2 770 aaKnown RBP9.51□□□□□ -0.89
TRIO-217ENST00000511019 P2RX5Q93086 422 aa9.51□□□□□ -0.89
TRIO-217ENST00000511019 PPP2R3CQ969Q6 453 aa9.51□□□□□ -0.89
TRIO-217ENST00000511019 PGBD1Q96JS3 809 aa9.51□□□□□ -0.89
TRIO-217ENST00000511019 GLT8D2Q9H1C3 349 aa9.51□□□□□ -0.89
TRIO-217ENST00000511019 AGO4Q9HCK5 861 aaKnown RBP9.51□□□□□ -0.89
TRIO-217ENST00000511019 ALG13Q9NP73 1137 aaKnown RBP9.51□□□□□ -0.89
TRIO-217ENST00000511019 LRFN2Q9ULH4 789 aa9.51□□□□□ -0.89
TRIO-217ENST00000511019 PCDHB7Q9Y5E2 793 aa9.51□□□□□ -0.89
TRIO-217ENST00000511019 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 hCG_1984214I3L0E3 225 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 BACH1O14867 736 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 DCXO43602 365 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 HBP1O60381 514 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 MMP1P03956 469 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 LINC00271P0C7V0 271 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 ADCY7P51828 1080 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
TRIO-217ENST00000511019 ZP2Q05996 745 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 DLX2Q07687 328 aaPredicted RBP9.5□□□□□ -0.89
TRIO-217ENST00000511019 ADAM15Q13444 863 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 CLUL1Q15846 466 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 RTN1Q16799 776 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 ODR4Q5SWX8 454 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 FAM160B1Q5W0V3 765 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 PPP1R18Q6NYC8 613 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 APOA5Q6Q788 366 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 MTHFD1LQ6UB35 978 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 ADHFE1Q8IWW8 467 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 CRIPAKQ8N1N5 446 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 ZNF713Q8N859 430 aaPredicted RBP9.5□□□□□ -0.89
TRIO-217ENST00000511019 SPPL3Q8TCT6 385 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 TRAPPC12Q8WVT3 735 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 ANO3Q9BYT9 981 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 RC3H2Q9HBD1 1191 aaKnown RBP9.5□□□□□ -0.89
TRIO-217ENST00000511019 TMEM260Q9NX78 707 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 GINS2Q9Y248 185 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 MRPL42Q9Y6G3 142 aaKnown RBP9.5□□□□□ -0.89
TRIO-217ENST00000511019 COL4A4P53420 1690 aaPredicted RBP9.5□□□□□ -0.89
TRIO-217ENST00000511019 IGSF9BQ9UPX0 1349 aa9.5□□□□□ -0.89
TRIO-217ENST00000511019 BAZ2BQ9UIF8 2168 aaKnown RBP9.5□□□□□ -0.89
TRIO-217ENST00000511019 SIP14410 1827 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 CHD9Q3L8U1 2897 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 IGKV6D-21A0A0A0MT36 114 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 DDX39AO00148 427 aaKnown RBP9.49□□□□□ -0.89
TRIO-217ENST00000511019 STXBP3O00186 592 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 GPR182O15218 404 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 MBTPS2O43462 519 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 RPS6KA5O75582 802 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 CSPG5O95196 566 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 SCG2P13521 617 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 IBSPP21815 317 aaPredicted RBP9.49□□□□□ -0.89
TRIO-217ENST00000511019 GTF2F1P35269 517 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRIO-217ENST00000511019 IRS1P35568 1242 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 ITGB3BPQ13352 177 aaPredicted RBP9.49□□□□□ -0.89
TRIO-217ENST00000511019 AP3B2Q13367 1082 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 CAMK1Q14012 370 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 SMAD2Q15796 467 aaKnown RBP9.49□□□□□ -0.89
TRIO-217ENST00000511019 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 PAN2Q504Q3 1202 aaKnown RBP9.49□□□□□ -0.89
TRIO-217ENST00000511019 ZNF484Q5JVG2 852 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 SPOUT1Q5T280 376 aaKnown RBP9.49□□□□□ -0.89
TRIO-217ENST00000511019 MCTP2Q6DN12 878 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 TYW1BQ6NUM6 668 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 SWSAP1Q6NVH7 229 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 MIS18BP1Q6P0N0 1132 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 PDXDC2PQ6P474 469 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 ABHD15Q6UXT9 468 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 NIPA1Q7RTP0 329 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 PLA2G4DQ86XP0 818 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 KLHL23Q8NBE8 558 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 MICAL1Q8TDZ2 1067 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 POF1BQ8WVV4 589 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 LINC01599Q8WXQ3 324 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 TCEANC2Q96MN5 208 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 POP1Q99575 1024 aaKnown RBP9.49□□□□□ -0.89
TRIO-217ENST00000511019 ZNF302Q9NR11 478 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 BARHL2Q9NY43 387 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 CD207Q9UJ71 328 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 NAP1L2Q9ULW6 460 aaPredicted RBP9.49□□□□□ -0.89
TRIO-217ENST00000511019 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 KDM3AQ9Y4C1 1321 aa9.49□□□□□ -0.89
TRIO-217ENST00000511019 COL4A6Q14031 1691 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 KLF18A0A0U1RQI7 1052 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 CCDC196A0A1B0GTZ2 297 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 GOLGA8AA7E2F4 631 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 GOLGA8BA8MQT2 603 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 LINC01565O15544 149 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 CCNE2O96020 404 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 ITGB1P05556 798 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 HMGB1P09429 215 aaKnown RBP9.48□□□□□ -0.89
TRIO-217ENST00000511019 DNAJB1P25685 340 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 SREBF1P36956 1147 aa9.48□□□□□ -0.89
TRIO-217ENST00000511019 SARSP49591 514 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms