RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CCDC47Q96A33 483 aaKnown RBP11.59□□□□□ -0.55
RFC1-211ENST00000509084 PAGE5Q96GU1 130 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 FAM167AQ96KS9 214 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 CCDC43Q96MW1 224 aaKnown RBP11.59□□□□□ -0.55
RFC1-211ENST00000509084 PLIN2Q99541 437 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 GPR20Q99678 358 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 AZI2Q9H6S1 392 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 ZNF302Q9NR11 478 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 ANKEF1Q9NU02 776 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 BLOC1S4Q9NUP1 217 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 RGL1Q9NZL6 768 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 KCND2Q9NZV8 630 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 PPME1Q9Y570 386 aa11.59□□□□□ -0.55
RFC1-211ENST00000509084 DOCK5Q9H7D0 1870 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 GSTTP1A0A1W2PQM5 241 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 ADCY3O60266 1144 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 LGR5O75473 907 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 PLA2G4BP0C869 781 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 SMPD1P17405 629 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 AFMP43652 599 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 ECM1Q16610 540 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 SWSAP1Q6NVH7 229 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 CNNM4Q6P4Q7 775 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 CCDC60Q8IWA6 550 aaPredicted RBP11.58□□□□□ -0.56
RFC1-211ENST00000509084 SYT2Q8N9I0 419 aaPredicted RBP11.58□□□□□ -0.56
RFC1-211ENST00000509084 TRIML1Q8N9V2 468 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 SMARCE1Q969G3 411 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 GSDMAQ96QA5 445 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 GTPBP4Q9BZE4 634 aaKnown RBP11.58□□□□□ -0.56
RFC1-211ENST00000509084 AP5M1Q9H0R1 490 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 RMND1Q9NWS8 449 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 KIAA1468Q9P260 1216 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 GABBR1Q9UBS5 961 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 DBR1Q9UK59 544 aaKnown RBP11.58□□□□□ -0.56
RFC1-211ENST00000509084 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
RFC1-211ENST00000509084 TRIM17Q9Y577 477 aa11.58□□□□□ -0.56
RFC1-211ENST00000509084 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
RFC1-211ENST00000509084 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.57□□□□□ -0.56
RFC1-211ENST00000509084 SYCE3A1L190 88 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 ARHGEF35A5YM69 484 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 E9PMD0 336 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 SEPT4O43236 478 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 SORBS3O60504 671 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 MSCO60682 206 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 DUSP11O75319 330 aaKnown RBP11.57□□□□□ -0.56
RFC1-211ENST00000509084 YWHABP31946 246 aaKnown RBP11.57□□□□□ -0.56
RFC1-211ENST00000509084 CPT1AP50416 773 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 SLC12A3P55017 1021 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 ZNF445P59923 1031 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 MDM2Q00987 491 aaPredicted RBP11.57□□□□□ -0.56
RFC1-211ENST00000509084 PRKCEQ02156 737 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 DPYDQ12882 1025 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 PNOCQ13519 176 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 MCM6Q14566 821 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 HSDL1Q3SXM5 330 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 XKR3Q5GH77 459 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 SASS6Q6UVJ0 657 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 PLPPR4Q7Z2D5 763 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 TLK2Q86UE8 772 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 COPS5Q92905 334 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 C7orf25Q9BPX7 421 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 TIPINQ9BVW5 301 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 TRIM9Q9C026 710 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 SMARCAD1Q9H4L7 1026 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 SPC25Q9HBM1 224 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 TUBE1Q9UJT0 475 aa11.57□□□□□ -0.56
RFC1-211ENST00000509084 ZNF215Q9UL58 517 aaPredicted RBP11.57□□□□□ -0.56
RFC1-211ENST00000509084 PVALEFA0A1B0GWK0 134 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 PPFIA4O75335 1185 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 OATP04181 439 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 SSBP05455 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
RFC1-211ENST00000509084 CCDC192P0DO97 292 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 HOXD8P13378 290 aaPredicted RBP11.56□□□□□ -0.56
RFC1-211ENST00000509084 CYP11B2P19099 503 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 GRK4P32298 578 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 RARRES1P49788 294 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 STAT5BP51692 787 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 ASIC1P78348 528 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 CAP1Q01518 475 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 KCNB1Q14721 858 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 UGCGQ16739 394 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 DGKDQ16760 1214 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 PRAMEF19Q5SWL8 479 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 MAP3K21Q5TCX8 1036 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 NT5DC1Q5TFE4 455 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 KCNK18Q7Z418 384 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 GPBP1Q86WP2 473 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 CKAP2LQ8IYA6 745 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 EXOC8Q8IYI6 725 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 SPATA20Q8TB22 786 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 LRRC15Q8TF66 581 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 AFG1LQ8WV93 481 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 GLG1Q92896 1179 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 GZF1Q9H116 711 aaPredicted RBP11.56□□□□□ -0.56
RFC1-211ENST00000509084 BHMT2Q9H2M3 363 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 BCAS3Q9H6U6 928 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 NRBP2Q9NSY0 501 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 ERAP1Q9NZ08 941 aa11.56□□□□□ -0.56
RFC1-211ENST00000509084 WRAP73Q9P2S5 460 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms