RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CDY2AQ9Y6F7 541 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 KDM3AQ9Y4C1 1321 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 BDP1A6H8Y1 2624 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 IPO5O00410 1097 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 BACH1O14867 736 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 STAG3L1P0CL83 205 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 EVCP57679 992 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 KRT76Q01546 638 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 ITGB3BPQ13352 177 aaPredicted RBP15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 ZNF484Q5JVG2 852 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 ZNF746Q6NUN9 644 aaPredicted RBP15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 ABHD15Q6UXT9 468 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 TMEM192Q8IY95 271 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 TRIM22Q8IYM9 498 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 CYP2W1Q8TAV3 490 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 ATP8B4Q8TF62 1192 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 PCYT2Q99447 389 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 ZNF577Q9BSK1 485 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 LMAN2LQ9H0V9 348 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 ZNF302Q9NR11 478 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 SH3GLB2Q9NR46 395 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 CEP131Q9UPN4 1083 aa15.45■□□□□ 0.06
CCHCR1-227ENST00000508852 TTC3P53804 2025 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 ENPP3O14638 875 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 IFNAR1P17181 557 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 TFF2Q03403 129 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 GPM6BQ13491 265 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 JAKMIP3Q5VZ66 844 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 CPLX2Q6PUV4 134 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 MTHFD1LQ6UB35 978 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 PGBD1Q96JS3 809 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 C17orf80Q9BSJ5 609 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 C11orf84Q9BUA3 381 aaPredicted RBP15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 PLVAPQ9BX97 442 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 CELF4Q9BZC1 486 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 FAM49AQ9H0Q0 323 aaPredicted RBP15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 FAM50BQ9Y247 325 aa15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 TCF20Q9UGU0 1960 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-227ENST00000508852 C5orf67F2Z3F1 127 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 NEFLP07196 543 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 PSAPP07602 524 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 CIITAP33076 1130 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 USP11P51784 963 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 PAK2Q13177 524 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 NAALADL2Q58DX5 795 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 KRT40Q6A162 431 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 PDXDC2PQ6P474 469 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 RUFY3Q7L099 469 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 CRYGNQ8WXF5 182 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 BBXQ8WY36 941 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 FAM167AQ96KS9 214 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 C1QTNF1Q9BXJ1 281 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 TMEM260Q9NX78 707 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 PCDHA10Q9Y5I2 948 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 CYP46A1Q9Y6A2 500 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 REV3LO60673 3130 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 ADGRA3Q8IWK6 1321 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 IGSF9BQ9UPX0 1349 aa15.43■□□□□ 0.06
CCHCR1-227ENST00000508852 IGLV3-22A0A075B6J6 115 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 FAM86B1E9PN63 330 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 EIF5BO60841 1220 aaKnown RBP15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 FAM86B2P0C5J1 330 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 BMPR1AP36894 532 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 PKN1Q16512 942 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 GALNT17Q6IS24 598 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 SPRED2Q7Z698 418 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 SKAP1Q86WV1 359 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 NPAS4Q8IUM7 802 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 CKAP2LQ8IYA6 745 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 BANK1Q8NDB2 785 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 CLP1Q92989 425 aaKnown RBP15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 ZNF274Q96GC6 653 aaPredicted RBP15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 TM6SF1Q9BZW5 370 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 NSUN3Q9H649 340 aaKnown RBP15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 UBE2ZQ9H832 354 aaPredicted RBP15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 LOXHD1Q8IVV2 1947 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 MUC3AQ02505 3323 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 XIRP2A4UGR9 3374 aa15.42■□□□□ 0.06
CCHCR1-227ENST00000508852 CPLX1O14810 134 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 GPR182O15218 404 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 MAGEB2O15479 319 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 DHX15O43143 795 aaKnown RBP15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 KLRC1P26715 233 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 PDIA3P30101 505 aaKnown RBP15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 CD52P31358 61 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 CTNNB1P35222 781 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 KCNQ1P51787 676 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 SSRP1Q08945 709 aaKnown RBP15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 BTG3Q14201 252 aaPredicted RBP15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 LEXMQ3ZCV2 418 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 SWSAP1Q6NVH7 229 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 CMTR2Q8IYT2 770 aaKnown RBP15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 PPP2R3CQ969Q6 453 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 ZNF689Q96CS4 500 aaPredicted RBP15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 SLC26A6Q9BXS9 759 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 ZSWIM6Q9HCJ5 1215 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 C1orf112Q9NSG2 853 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 LRFN2Q9ULH4 789 aa15.41■□□□□ 0.06
CCHCR1-227ENST00000508852 PADI3Q9ULW8 664 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms