RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CDY2AQ9Y6F7 541 aa10.84□□□□□ -0.67
NEDD9-211ENST00000508546 CYTH3O43739 400 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 STAG3L1P0CL83 205 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 TCF7P36402 384 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-211ENST00000508546 NRIP1P48552 1158 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 MRPS6P82932 125 aaKnown RBP10.83□□□□□ -0.68
NEDD9-211ENST00000508546 UBE3AQ05086 875 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 HDAC1Q13547 482 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-211ENST00000508546 GRM4Q14833 912 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 GRIK4Q16099 956 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 MARCH8Q5T0T0 291 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 FAM43BQ6ZT52 329 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-211ENST00000508546 RTN4RL1Q86UN2 441 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-211ENST00000508546 KIAA2013Q8IYS2 634 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 ATP8B4Q8TF62 1192 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 DNAJB3Q8WWF6 145 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 SUSD6Q92537 303 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 DLL3Q9NYJ7 618 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 ERAP1Q9NZ08 941 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 RTEL1Q9NZ71 1219 aa10.83□□□□□ -0.68
NEDD9-211ENST00000508546 BARX2Q9UMQ3 279 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-211ENST00000508546 CD52P31358 61 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 SP4Q02446 784 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 IER5Q5VY09 327 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 CWC27Q6UX04 472 aaKnown RBP10.82□□□□□ -0.68
NEDD9-211ENST00000508546 RBM23Q86U06 439 aaKnown RBP10.82□□□□□ -0.68
NEDD9-211ENST00000508546 NLRX1Q86UT6 975 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 SEPT1Q8WYJ6 367 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 GPRASP2Q96D09 838 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 CDCA3Q99618 268 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-211ENST00000508546 SMARCAD1Q9H4L7 1026 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 TLE6Q9H808 572 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 IGSF9BQ9UPX0 1349 aa10.82□□□□□ -0.68
NEDD9-211ENST00000508546 MYH9P35579 1960 aaKnown RBP10.81□□□□□ -0.68
NEDD9-211ENST00000508546 GSTTP1A0A1W2PQM5 241 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 RRN3P2A6NIE6 340 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 HIP1O00291 1037 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 PIK3CDO00329 1044 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 SCG2P13521 617 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 KCNA2P16389 499 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 PAN2Q504Q3 1202 aaKnown RBP10.81□□□□□ -0.68
NEDD9-211ENST00000508546 PDE12Q6L8Q7 609 aaKnown RBP10.81□□□□□ -0.68
NEDD9-211ENST00000508546 TMEM184AQ6ZMB5 413 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 CYB5R4Q7L1T6 521 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 COL26A1Q96A83 441 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 CDHR1Q96JP9 859 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 LNPKQ9C0E8 428 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 DIAPH3Q9NSV4 1193 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 PADI3Q9ULW8 664 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 PCDHGC5Q9Y5F6 944 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 TRPV2Q9Y5S1 764 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 GPR179Q6PRD1 2367 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 KDM3AQ9Y4C1 1321 aa10.81□□□□□ -0.68
NEDD9-211ENST00000508546 ANKRD11Q6UB99 2663 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-211ENST00000508546 M0QZ92 97 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 ATP9AO75110 1047 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 ARP10275 920 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 MARK3P27448 753 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 TROAPQ12815 778 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 KCNC3Q14003 757 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 DUSP6Q16828 381 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 VN1R2Q8NFZ6 395 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 SMARCC2Q8TAQ2 1214 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 RASGRP4Q8TDF6 673 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 GLG1Q92896 1179 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 CUL5Q93034 780 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 NEK1Q96PY6 1258 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 SMOC2Q9H3U7 446 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 AAASQ9NRG9 546 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
NEDD9-211ENST00000508546 PCDHB12Q9Y5F1 795 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 WDR81Q562E7 1941 aa10.8□□□□□ -0.68
NEDD9-211ENST00000508546 MEIS2O14770 477 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 PER2O15055 1255 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 SRGAP2BP0DMP2 458 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 INSRRP14616 1297 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 SP100P23497 879 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-211ENST00000508546 SARSP49591 514 aaKnown RBP10.79□□□□□ -0.68
NEDD9-211ENST00000508546 PAK2Q13177 524 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 CWF19L1Q69YN2 538 aaKnown RBP10.79□□□□□ -0.68
NEDD9-211ENST00000508546 USP17L6PQ6QN14 398 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 ZBTB33Q86T24 672 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 MICAL1Q8TDZ2 1067 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 TNPO1Q92973 898 aaKnown RBP10.79□□□□□ -0.68
NEDD9-211ENST00000508546 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 CELF4Q9BZC1 486 aaKnown RBP10.79□□□□□ -0.68
NEDD9-211ENST00000508546 FAM49AQ9H0Q0 323 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-211ENST00000508546 S1PR5Q9H228 398 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 LRFN2Q9ULH4 789 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 PCDHA2Q9Y5H9 948 aa10.79□□□□□ -0.68
NEDD9-211ENST00000508546 ERICH2A1L162 156 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 FSCN2O14926 492 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 MAFGO15525 162 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 PPFIA3O75145 1194 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 FGF18O76093 207 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 BRD1O95696 1058 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 HOXB3P14651 431 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-211ENST00000508546 HOXB8P17481 243 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms