RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ZNF76P36508 570 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 FBXO47Q5MNV8 452 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 CCDC60Q8IWA6 550 aaPredicted RBP18.46■□□□□ 0.55
LMNA-222ENST00000508500 APBB2Q92870 758 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 SLC26A6Q9BXS9 759 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 AZI2Q9H6S1 392 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 AGO3Q9H9G7 860 aaKnown RBP18.46■□□□□ 0.55
LMNA-222ENST00000508500 C6orf50Q9HD87 102 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 VPS54Q9P1Q0 977 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 RAPGEFL1Q9UHV5 662 aa18.46■□□□□ 0.55
LMNA-222ENST00000508500 REXO1Q8N1G1 1221 aaKnown RBP18.45■□□□□ 0.54
LMNA-222ENST00000508500 LENG9Q96B70 501 aa18.45■□□□□ 0.54
LMNA-222ENST00000508500 FAM49AQ9H0Q0 323 aaPredicted RBP18.45■□□□□ 0.54
LMNA-222ENST00000508500 TRPC6Q9Y210 931 aa18.45■□□□□ 0.54
LMNA-222ENST00000508500 FNDC1Q4ZHG4 1894 aaPredicted RBP18.45■□□□□ 0.54
LMNA-222ENST00000508500 IPO5O00410 1097 aaKnown RBP18.44■□□□□ 0.54
LMNA-222ENST00000508500 ENPP3O14638 875 aa18.44■□□□□ 0.54
LMNA-222ENST00000508500 CIITAP33076 1130 aa18.44■□□□□ 0.54
LMNA-222ENST00000508500 MRPS6P82932 125 aaKnown RBP18.44■□□□□ 0.54
LMNA-222ENST00000508500 TMEM62Q0P6H9 643 aa18.44■□□□□ 0.54
LMNA-222ENST00000508500 RTN4RL1Q86UN2 441 aaPredicted RBP18.44■□□□□ 0.54
LMNA-222ENST00000508500 LINC01599Q8WXQ3 324 aa18.44■□□□□ 0.54
LMNA-222ENST00000508500 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
LMNA-222ENST00000508500 TM6SF1Q9BZW5 370 aa18.44■□□□□ 0.54
LMNA-222ENST00000508500 TSPYL2Q9H2G4 693 aaPredicted RBP18.44■□□□□ 0.54
LMNA-222ENST00000508500 PCDHA2Q9Y5H9 948 aa18.44■□□□□ 0.54
LMNA-222ENST00000508500 POTEB3A0JP26 581 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 ZBTB42B2RXF5 422 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 LINC00271P0C7V0 271 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 GNA11P29992 359 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 AAK1Q2M2I8 961 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 POTEBQ6S5H4 581 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 MTHFD1LQ6UB35 978 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 RSPH3Q86UC2 560 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 CCDC12Q8WUD4 166 aaPredicted RBP18.43■□□□□ 0.54
LMNA-222ENST00000508500 RC3H2Q9HBD1 1191 aaKnown RBP18.43■□□□□ 0.54
LMNA-222ENST00000508500 LMCD1Q9NZU5 365 aa18.43■□□□□ 0.54
LMNA-222ENST00000508500 SMIM35A0A1B0GVV1 85 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 CD52P31358 61 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 AKAP17AQ02040 695 aaKnown RBP18.42■□□□□ 0.54
LMNA-222ENST00000508500 SKIV2LQ15477 1246 aaKnown RBP18.42■□□□□ 0.54
LMNA-222ENST00000508500 MCTP2Q6DN12 878 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 SWSAP1Q6NVH7 229 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 TSHZ1Q6ZSZ6 1077 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 ZNF274Q96GC6 653 aaPredicted RBP18.42■□□□□ 0.54
LMNA-222ENST00000508500 AIFM3Q96NN9 605 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 ZNF577Q9BSK1 485 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 ZNF302Q9NR11 478 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 COG5Q9UP83 839 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 CYP46A1Q9Y6A2 500 aa18.42■□□□□ 0.54
LMNA-222ENST00000508500 KLRC1P26715 233 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 SLC26A2P50443 739 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 NPY5RQ15761 445 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 EPC2Q52LR7 807 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 PRR16Q569H4 304 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 CRIPAKQ8N1N5 446 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 FBXO22Q8NEZ5 403 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 ATP8B4Q8TF62 1192 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 YME1L1Q96TA2 773 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 CDHR5Q9HBB8 845 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 MAFBQ9Y5Q3 323 aaPredicted RBP18.41■□□□□ 0.54
LMNA-222ENST00000508500 TRPV2Q9Y5S1 764 aa18.41■□□□□ 0.54
LMNA-222ENST00000508500 PLXNA4Q9HCM2 1894 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 M0R2N6 131 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 BACH1O14867 736 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 HBP1O60381 514 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 DTNBO60941 627 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
LMNA-222ENST00000508500 STK3Q13188 491 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 IER5Q5VY09 327 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 ZNF746Q6NUN9 644 aaPredicted RBP18.4■□□□□ 0.54
LMNA-222ENST00000508500 MIS18BP1Q6P0N0 1132 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 PDXDC2PQ6P474 469 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 CCDC148Q8NFR7 591 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 CELF4Q9BZC1 486 aaKnown RBP18.4■□□□□ 0.54
LMNA-222ENST00000508500 TBC1D22BQ9NU19 505 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 SQORQ9Y6N5 450 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 IGSF9BQ9UPX0 1349 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 KDM3AQ9Y4C1 1321 aa18.4■□□□□ 0.54
LMNA-222ENST00000508500 MSH4O15457 936 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 SSRP1Q08945 709 aaKnown RBP18.39■□□□□ 0.53
LMNA-222ENST00000508500 FAM160B1Q5W0V3 765 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 TMEM192Q8IY95 271 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 KIAA0319LQ8IZA0 1049 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 BICD2Q8TD16 824 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 TNPO1Q92973 898 aaKnown RBP18.39■□□□□ 0.53
LMNA-222ENST00000508500 GJA10Q969M2 543 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 ZNF689Q96CS4 500 aaPredicted RBP18.39■□□□□ 0.53
LMNA-222ENST00000508500 TMX1Q9H3N1 280 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 PADI3Q9ULW8 664 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 COL1A2P08123 1366 aa18.39■□□□□ 0.53
LMNA-222ENST00000508500 H3BNC9 293 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 RPLP2P05387 115 aaKnown RBP18.38■□□□□ 0.53
LMNA-222ENST00000508500 NLRP5P59047 1200 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 ZNF484Q5JVG2 852 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 NME8Q8N427 588 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 TMEM40Q8WWA1 233 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 HLA-CQ95604 372 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms