RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SLC43A3Q8NBI5 491 aa11.48□□□□□ -0.57
HTT-204ENST00000508321 CALML4Q96GE6 196 aa11.48□□□□□ -0.57
HTT-204ENST00000508321 CDK5RAP3Q96JB5 506 aa11.48□□□□□ -0.57
HTT-204ENST00000508321 UIMC1Q96RL1 719 aa11.48□□□□□ -0.57
HTT-204ENST00000508321 CCSER1Q9C0I3 900 aa11.48□□□□□ -0.57
HTT-204ENST00000508321 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
HTT-204ENST00000508321 TRPC6Q9Y210 931 aa11.48□□□□□ -0.57
HTT-204ENST00000508321 NRCAMQ92823 1304 aa11.48□□□□□ -0.57
HTT-204ENST00000508321 TANC1Q9C0D5 1861 aa11.48□□□□□ -0.57
HTT-204ENST00000508321 ALPK3Q96L96 1907 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 RRN3P2A6NIE6 340 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 ARVCFO00192 962 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 XRCC6P12956 609 aaKnown RBP eCLIP11.47□□□□□ -0.57
HTT-204ENST00000508321 CCT6AP40227 531 aaKnown RBP11.47□□□□□ -0.57
HTT-204ENST00000508321 PPFIA1Q13136 1202 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 PLCB4Q15147 1175 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 UGCGQ16739 394 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 ZNF484Q5JVG2 852 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 CABP7Q86V35 215 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 CKAP2LQ8IYA6 745 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 TMEM87AQ8NBN3 555 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 RASSF8Q8NHQ8 419 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 DIS3LQ8TF46 1054 aaKnown RBP11.47□□□□□ -0.57
HTT-204ENST00000508321 PAWRQ96IZ0 340 aaKnown RBP11.47□□□□□ -0.57
HTT-204ENST00000508321 CCDC43Q96MW1 224 aaKnown RBP11.47□□□□□ -0.57
HTT-204ENST00000508321 GBP4Q96PP9 640 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 NACC1Q96RE7 527 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 JPH2Q9BR39 696 aaPredicted RBP11.47□□□□□ -0.57
HTT-204ENST00000508321 HTATIP2Q9BUP3 242 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 SENP6Q9GZR1 1112 aaPredicted RBP11.47□□□□□ -0.57
HTT-204ENST00000508321 CSRNP2Q9H175 543 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 NRBP2Q9NSY0 501 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 CCDC39Q9UFE4 941 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 TELO2Q9Y4R8 837 aa11.47□□□□□ -0.57
HTT-204ENST00000508321 A0A1W2PQ27 194 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 A0A1W2PQ64 194 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 A0A1W2PQD8 194 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 TLR3O15455 904 aaKnown RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 GAS2O43903 313 aaKnown RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 SLITRK3O94933 977 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 SMIM10L2AP0DMW4 78 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 SMIM10L2BP0DMW5 78 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 EN2P19622 333 aaPredicted RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 MARK3P27448 753 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 YWHABP31946 246 aaKnown RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 CYP4A11Q02928 519 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 NBPF20Q3BBV1 942 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 TMEM119Q4V9L6 283 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 AXDND1Q5T1B0 1012 aaPredicted RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 ADALQ6DHV7 355 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 CCDC73Q6ZRK6 1079 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 ANKRD33Q7Z3H0 272 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 CATSPER3Q86XQ3 398 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 TPH2Q8IWU9 490 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 LMBR1Q8WVP7 490 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 SYMPKQ92797 1274 aaKnown RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 VTI1AQ96AJ9 217 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 DYDC2Q96IM9 177 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 TOX2Q96NM4 488 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 NIFKQ9BYG3 293 aaKnown RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 FAM13BQ9NYF5 915 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 STK17AQ9UEE5 414 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 SEPT9Q9UHD8 586 aaPredicted RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 DBR1Q9UK59 544 aaKnown RBP11.46□□□□□ -0.57
HTT-204ENST00000508321 PCDHA7Q9UN72 937 aa11.46□□□□□ -0.57
HTT-204ENST00000508321 C17orf102A2RUQ5 167 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 MBLAC1A4D2B0 266 aaPredicted RBP11.45□□□□□ -0.58
HTT-204ENST00000508321 MAGEB2O15479 319 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 ZNF862O60290 1169 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 CAND2O75155 1236 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 MED24O75448 989 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 SPATA31C1P0DKV0 1188 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 RFC5P40937 340 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 PSMC6P62333 389 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 CTTNQ14247 550 aaKnown RBP11.45□□□□□ -0.58
HTT-204ENST00000508321 GRIK4Q16099 956 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 RESP18Q5W5W9 173 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 TAF2Q6P1X5 1199 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 SLC39A5Q6ZMH5 540 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 ZNF710Q8N1W2 664 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 CCDC155Q8N6L0 562 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 MMTAG2Q9BU76 263 aaKnown RBP11.45□□□□□ -0.58
HTT-204ENST00000508321 CUEDC2Q9H467 287 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 MAGEF1Q9HAY2 307 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 RGL1Q9NZL6 768 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 KCND2Q9NZV8 630 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 TUBE1Q9UJT0 475 aa11.45□□□□□ -0.58
HTT-204ENST00000508321 TRIP12Q14669 1992 aaPredicted RBP11.45□□□□□ -0.58
HTT-204ENST00000508321 GRIN2DO15399 1336 aa11.44□□□□□ -0.58
HTT-204ENST00000508321 FAM237AA0A1B0GTK4 181 aa11.44□□□□□ -0.58
HTT-204ENST00000508321 GOLGA6L4A6NEF3 574 aa11.44□□□□□ -0.58
HTT-204ENST00000508321 PP2D1A8MPX8 630 aa11.44□□□□□ -0.58
HTT-204ENST00000508321 GOLGA6L22H0YM25 854 aa11.44□□□□□ -0.58
HTT-204ENST00000508321 DGAT1O75907 488 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms