RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 FAM90A27PA6NNH2 459 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 HMGCRP04035 888 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 FGRP09769 529 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 IL13RA1P78552 427 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 CXXC5Q7LFL8 322 aaKnown RBP6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 NLGN4XQ8N0W4 816 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 LARP4BQ92615 738 aaKnown RBP6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 KIAA1683Q9H0B3 1180 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 TLR9Q9NR96 1032 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 ARHGAP28Q9P2N2 729 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 FBXO10Q9UK96 956 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 SRPK3Q9UPE1 567 aa6.96□□□□□ -1.3
TRAPPC13-209ENST00000508304 ASXL2Q76L83 1435 aa6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 MSX2P35548 267 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 EIF4HQ15056 248 aaKnown RBP6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 NSMFQ6X4W1 530 aa6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 USP30Q70CQ3 517 aa6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 ALG1Q9BT22 464 aa6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 MMRN2Q9H8L6 949 aa6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 AURKAIP1Q9NWT8 199 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 PLA2G3Q9NZ20 509 aa6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 CCDC9Q9Y3X0 531 aaKnown RBP6.95□□□□□ -1.3
TRAPPC13-209ENST00000508304 IQCA1LA6NCM1 817 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 ADH4P08319 380 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 PTGS1P23219 599 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 HIBADHP31937 336 aaKnown RBP6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 KCNQ1P51787 676 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 STILQ15468 1287 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 DDR2Q16832 855 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 PCSK4Q6UW60 755 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 ZNF483Q8TF39 744 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 ST7Q9NRC1 585 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 RIC8BQ9NVN3 520 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 GALNT8Q9NY28 637 aa6.94□□□□□ -1.3
TRAPPC13-209ENST00000508304 UNCXA6NJT0 531 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 WNT9AO14904 365 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 MAKP20794 623 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 DNAJA1P31689 397 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 ADCY8P40145 1251 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 IFRD2Q12894 506 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 GPR19Q15760 415 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 TRIM68Q6AZZ1 485 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 GPR135Q8IZ08 494 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 HNRNPLLQ8WVV9 542 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 WNK4Q96J92 1243 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 NELFAQ9H3P2 528 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 INCENPQ9NQS7 918 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 CEP72Q9P209 647 aa6.93□□□□□ -1.3
TRAPPC13-209ENST00000508304 AOAHP28039 575 aa6.92□□□□□ -1.3
TRAPPC13-209ENST00000508304 PCOLCEQ15113 449 aa6.92□□□□□ -1.3
TRAPPC13-209ENST00000508304 YOD1Q5VVQ6 348 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC13-209ENST00000508304 ARHGAP36Q6ZRI8 547 aa6.92□□□□□ -1.3
TRAPPC13-209ENST00000508304 DPH6Q7L8W6 267 aa6.92□□□□□ -1.3
TRAPPC13-209ENST00000508304 BTBD7Q9P203 1132 aa6.92□□□□□ -1.3
TRAPPC13-209ENST00000508304 TRAV20A0A0B4J274 112 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 MAN2B1O00754 1011 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 AMY2AP04746 511 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 AMY2BP19961 511 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 GJA4P35212 333 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 FIGNQ5HY92 759 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 ZNF627Q7L945 461 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 MRGPRGQ86SM5 289 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 DNAJC10Q8IXB1 793 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 AGAP2Q99490 1192 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 OR10A2Q9H208 303 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 ATP23Q9Y6H3 246 aa6.91□□□□□ -1.3
TRAPPC13-209ENST00000508304 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 C4BPAP04003 597 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 PDE6AP16499 860 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 MC4RP32245 332 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 HGFACQ04756 655 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 PAK1Q13153 545 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 GRM7Q14831 915 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 ADGRE4PQ86SQ3 457 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 TMPRSS6Q8IU80 811 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 ST13P5Q8NFI4 369 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 BTBD2Q9BX70 525 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 HECAQ9UBI9 543 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 CDC42EP3Q9UKI2 254 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 GIT1Q9Y2X7 761 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 R3HCC1Q9Y3T6 440 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 TRAF6Q9Y4K3 522 aa6.9□□□□□ -1.3
TRAPPC13-209ENST00000508304 PMS2P1A4D2B8 440 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 MPIG6BO95866 241 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 ERCC5P28715 1186 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 MRE11P49959 708 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 HERVK_113P62684 666 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 HHEXQ03014 270 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 GNL2Q13823 731 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 KANK2Q63ZY3 851 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 TMEM200BQ69YZ2 307 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 FILIP1Q7Z7B0 1213 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 SGMS1Q86VZ5 419 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 MCF2L2Q86YR7 1114 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 AMNQ9BXJ7 453 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 DMRT1Q9Y5R6 373 aa6.89□□□□□ -1.31
TRAPPC13-209ENST00000508304 A0A0G2JNJ9 132 aa6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 SPTY2D1Q68D10 685 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-209ENST00000508304 Q6ZPA2 131 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms