RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 NPAS4Q8IUM7 802 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 FANCBQ8NB91 859 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 PPP2R3CQ969Q6 453 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 PCYT2Q99447 389 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 AGO3Q9H9G7 860 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 KCNH7Q9NS40 1196 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 SLC9A2Q9UBY0 812 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 PLAGL2Q9UPG8 496 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 SLC12A7Q9Y666 1083 aa12.92□□□□□ -0.34
CCHCR1-220ENST00000506831 IGSF9BQ9UPX0 1349 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 MBTPS2O43462 519 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 FOSP01100 380 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 PSMA5P28066 241 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 STAT5BP51692 787 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 ADAM15Q13444 863 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 SMAD4Q13485 552 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 COL9A3Q14050 684 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 SDF4Q9BRK5 362 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 TRPV2Q9Y5S1 764 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 ZNF318Q5VUA4 2279 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 C5orf42Q9H799 3197 aa12.91□□□□□ -0.34
CCHCR1-220ENST00000506831 LOXHD1Q8IVV2 1947 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 SMIM35A0A1B0GVV1 85 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 ATG7O95352 703 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 EYA4O95677 639 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 CPA1P15085 419 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 CD52P31358 61 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 IRS1P35568 1242 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 IGBP1P78318 339 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 DLX2Q07687 328 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 CAMK1Q14012 370 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 PLCB4Q15147 1175 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 UBE2SQ16763 222 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 CMTR1Q8N1G2 835 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 LINC01599Q8WXQ3 324 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 CELF4Q9BZC1 486 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 PADI3Q9ULW8 664 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 TRPC6Q9Y210 931 aa12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 MRPL42Q9Y6G3 142 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-220ENST00000506831 IGKV6D-21A0A0A0MT36 114 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 hCG_1984214I3L0E3 225 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 TBX10O75333 385 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 SCG2P13521 617 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 RXRAP19793 462 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 ACTR2P61160 394 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 PAK2Q13177 524 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 CEP55Q53EZ4 464 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 HERC4Q5GLZ8 1057 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 ODR4Q5SWX8 454 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 PPP1R18Q6NYC8 613 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 SYNE3Q6ZMZ3 975 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 DHX32Q7L7V1 743 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 HEATR3Q7Z4Q2 680 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 ZNF713Q8N859 430 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 UIMC1Q96RL1 719 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 KIF2CQ99661 725 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 FAM49AQ9H0Q0 323 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 GLT8D2Q9H1C3 349 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 ALG13Q9NP73 1137 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 RIC8AQ9NPQ8 531 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 PKD2L1Q9P0L9 805 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 CD207Q9UJ71 328 aa12.89□□□□□ -0.35
CCHCR1-220ENST00000506831 MEIS1O00470 390 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 HBP1O60381 514 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 ITGB1P05556 798 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 KRT76Q01546 638 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 UBE3AQ05086 875 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 COASYQ13057 564 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 AP3B2Q13367 1082 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 NIPA1Q7RTP0 329 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 CCDC82Q8N4S0 544 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 EFHBQ8N7U6 833 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 KLHL23Q8NBE8 558 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 CYP2W1Q8TAV3 490 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 MSLNLQ96KJ4 702 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 MFSD14AQ96MC6 490 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 TCEANC2Q96MN5 208 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 LRRC2Q9BYS8 371 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 CYP46A1Q9Y6A2 500 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 TECTAO75443 2155 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 TRIOO75962 3097 aa12.88□□□□□ -0.35
CCHCR1-220ENST00000506831 COL1A2P08123 1366 aa12.87□□□□□ -0.35
CCHCR1-220ENST00000506831 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
CCHCR1-220ENST00000506831 FSD2A1L4K1 749 aa12.87□□□□□ -0.35
CCHCR1-220ENST00000506831 STXBP3O00186 592 aa12.87□□□□□ -0.35
CCHCR1-220ENST00000506831 ARP10275 920 aa12.87□□□□□ -0.35
CCHCR1-220ENST00000506831 DNAJB1P25685 340 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms