RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 POTEBQ6S5H4 581 aa16.6■□□□□ 0.25
SEC24D-208ENST00000506622 NME8Q8N427 588 aa16.6■□□□□ 0.25
SEC24D-208ENST00000506622 ZNF689Q96CS4 500 aaPredicted RBP16.6■□□□□ 0.25
SEC24D-208ENST00000506622 PLVAPQ9BX97 442 aa16.6■□□□□ 0.25
SEC24D-208ENST00000506622 RC3H2Q9HBD1 1191 aaKnown RBP16.6■□□□□ 0.25
SEC24D-208ENST00000506622 AGO4Q9HCK5 861 aaKnown RBP16.6■□□□□ 0.25
SEC24D-208ENST00000506622 BARHL2Q9NY43 387 aa16.6■□□□□ 0.25
SEC24D-208ENST00000506622 MYH9P35579 1960 aaKnown RBP16.59■□□□□ 0.25
SEC24D-208ENST00000506622 KLF18A0A0U1RQI7 1052 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 GOLGA8AA7E2F4 631 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 GOLGA8BA8MQT2 603 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 STXBP3O00186 592 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 STAG3L1P0CL83 205 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 SREBF1P36956 1147 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 FGD1P98174 961 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 FUT2Q10981 343 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 PAK2Q13177 524 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 ITGB3BPQ13352 177 aaPredicted RBP16.59■□□□□ 0.25
SEC24D-208ENST00000506622 TSGA10IPQ3SY00 556 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 TRAPPC12Q8WVT3 735 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 CELF4Q9BZC1 486 aaKnown RBP16.59■□□□□ 0.25
SEC24D-208ENST00000506622 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
SEC24D-208ENST00000506622 PADI3Q9ULW8 664 aa16.59■□□□□ 0.25
SEC24D-208ENST00000506622 SMIM35A0A1B0GVV1 85 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 FAM86C2PA6NEL3 165 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 BACH1O14867 736 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 ATG7O95352 703 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.24
SEC24D-208ENST00000506622 LINC00271P0C7V0 271 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 ALADP13716 330 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 KRT76Q01546 638 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 COL19A1Q14993 1142 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 FAM160B1Q5W0V3 765 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 RTN4RL1Q86UN2 441 aaPredicted RBP16.58■□□□□ 0.24
SEC24D-208ENST00000506622 NPAS4Q8IUM7 802 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 TMEM260Q9NX78 707 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 ARIH1Q9Y4X5 557 aaPredicted RBP16.58■□□□□ 0.24
SEC24D-208ENST00000506622 PIEZO1Q92508 2521 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.24
SEC24D-208ENST00000506622 IGSF9BQ9UPX0 1349 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 DDX39AO00148 427 aaKnown RBP16.57■□□□□ 0.24
SEC24D-208ENST00000506622 HBP1O60381 514 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 KLRC1P26715 233 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 RCAN1P53805 252 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 ADCK5Q3MIX3 580 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 JAKMIP3Q5VZ66 844 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 NIPA1Q7RTP0 329 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 CMTR2Q8IYT2 770 aaKnown RBP16.57■□□□□ 0.24
SEC24D-208ENST00000506622 RASEFQ8IZ41 740 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 LINC01599Q8WXQ3 324 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 ALG13Q9NP73 1137 aaKnown RBP16.57■□□□□ 0.24
SEC24D-208ENST00000506622 C11orf16Q9NQ32 467 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 PRKAG3Q9UGI9 489 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 LRFN2Q9ULH4 789 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 PLAGL2Q9UPG8 496 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 KDM3AQ9Y4C1 1321 aa16.57■□□□□ 0.24
SEC24D-208ENST00000506622 IGKV6D-21A0A0A0MT36 114 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 CCDC196A0A1B0GTZ2 297 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 CSPG5O95196 566 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 MMP1P03956 469 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 SCG2P13521 617 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 CDC27P30260 824 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 CLK2P49760 499 aaKnown RBP16.56■□□□□ 0.24
SEC24D-208ENST00000506622 HYAL1Q12794 435 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 NFX1Q12986 1120 aaKnown RBP16.56■□□□□ 0.24
SEC24D-208ENST00000506622 NAALADL2Q58DX5 795 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 ABHD15Q6UXT9 468 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 FAM43BQ6ZT52 329 aaPredicted RBP16.56■□□□□ 0.24
SEC24D-208ENST00000506622 CENPQQ7L2Z9 268 aaPredicted RBP16.56■□□□□ 0.24
SEC24D-208ENST00000506622 PLA2G4DQ86XP0 818 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 ATP8B4Q8TF62 1192 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 P2RX5Q93086 422 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 PPP2R3CQ969Q6 453 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 IGFLR1Q9H665 355 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 ZNF302Q9NR11 478 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 FAM217BQ9NTX9 383 aaPredicted RBP16.56■□□□□ 0.24
SEC24D-208ENST00000506622 GINS2Q9Y248 185 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 MRPL42Q9Y6G3 142 aaKnown RBP16.56■□□□□ 0.24
SEC24D-208ENST00000506622 WDFY4Q6ZS81 3184 aa16.56■□□□□ 0.24
SEC24D-208ENST00000506622 CDC45O75419 566 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 CCNE2O96020 404 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 ADD1P35611 737 aaKnown RBP16.55■□□□□ 0.24
SEC24D-208ENST00000506622 LTBRP36941 435 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 METAP2P50579 478 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEC24D-208ENST00000506622 PFKFB3Q16875 520 aaPredicted RBP16.55■□□□□ 0.24
SEC24D-208ENST00000506622 TMEM266Q2M3C6 531 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 CTC1Q2NKJ3 1217 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 PAN2Q504Q3 1202 aaKnown RBP16.55■□□□□ 0.24
SEC24D-208ENST00000506622 ZNF484Q5JVG2 852 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 ODR4Q5SWX8 454 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 MCTP2Q6DN12 878 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 PDXDC2PQ6P474 469 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 CRIPAKQ8N1N5 446 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 CCDC12Q8WUD4 166 aaPredicted RBP16.55■□□□□ 0.24
SEC24D-208ENST00000506622 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
SEC24D-208ENST00000506622 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
SEC24D-208ENST00000506622 KIAA1671Q9BY89 1806 aa16.54■□□□□ 0.24
SEC24D-208ENST00000506622 COL1A2P08123 1366 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms