RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SQORQ9Y6N5 450 aa28.09■■■□□ 2.09
HERC4-212ENST00000505760 FAM86B1E9PN63 330 aa28.08■■■□□ 2.09
HERC4-212ENST00000505760 CCNE2O96020 404 aa28.08■■■□□ 2.09
HERC4-212ENST00000505760 FAM86B2P0C5J1 330 aa28.08■■■□□ 2.09
HERC4-212ENST00000505760 HSPA4P34932 840 aa28.08■■■□□ 2.09
HERC4-212ENST00000505760 C1QTNF1Q9BXJ1 281 aa28.08■■■□□ 2.09
HERC4-212ENST00000505760 FTHL17Q9BXU8 183 aa28.08■■■□□ 2.09
HERC4-212ENST00000505760 SNX14Q9Y5W7 946 aa28.08■■■□□ 2.09
HERC4-212ENST00000505760 ESYT2A0FGR8 921 aa28.07■■■□□ 2.08
HERC4-212ENST00000505760 BTG3Q14201 252 aaPredicted RBP28.07■■■□□ 2.08
HERC4-212ENST00000505760 LEXMQ3ZCV2 418 aa28.07■■■□□ 2.08
HERC4-212ENST00000505760 MCTP2Q6DN12 878 aa28.07■■■□□ 2.08
HERC4-212ENST00000505760 ABHD15Q6UXT9 468 aa28.07■■■□□ 2.08
HERC4-212ENST00000505760 REXO1Q8N1G1 1221 aaKnown RBP28.07■■■□□ 2.08
HERC4-212ENST00000505760 CELF4Q9BZC1 486 aaKnown RBP28.07■■■□□ 2.08
HERC4-212ENST00000505760 ZMYND12Q9H0C1 365 aa28.07■■■□□ 2.08
HERC4-212ENST00000505760 MYO7AQ13402 2215 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 IGKV6D-21A0A0A0MT36 114 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 SMIM35A0A1B0GVV1 85 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 IPO5O00410 1097 aaKnown RBP28.06■■■□□ 2.08
HERC4-212ENST00000505760 RB1P06400 928 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 CYP3A4P08684 503 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 BMPR1AP36894 532 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 AKAP17AQ02040 695 aaKnown RBP28.06■■■□□ 2.08
HERC4-212ENST00000505760 PAK2Q13177 524 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 MTHFD1LQ6UB35 978 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 NME8Q8N427 588 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 CCDC136Q96JN2 1154 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 C11orf84Q9BUA3 381 aaPredicted RBP28.06■■■□□ 2.08
HERC4-212ENST00000505760 RC3H2Q9HBD1 1191 aaKnown RBP28.06■■■□□ 2.08
HERC4-212ENST00000505760 PADI3Q9ULW8 664 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 IGSF9BQ9UPX0 1349 aa28.06■■■□□ 2.08
HERC4-212ENST00000505760 MYH9P35579 1960 aaKnown RBP28.06■■■□□ 2.08
HERC4-212ENST00000505760 C5orf67F2Z3F1 127 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 PRPF3O43395 683 aaKnown RBP28.05■■■□□ 2.08
HERC4-212ENST00000505760 HBP1O60381 514 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 GNA11P29992 359 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 KRT76Q01546 638 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 TCEAL5Q5H9L2 206 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 MIS18BP1Q6P0N0 1132 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 PDXDC2PQ6P474 469 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 ATP8B4Q8TF62 1192 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 LINC01599Q8WXQ3 324 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 UIMC1Q96RL1 719 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 ZNF577Q9BSK1 485 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 NSUN3Q9H649 340 aaKnown RBP28.05■■■□□ 2.08
HERC4-212ENST00000505760 ZNF302Q9NR11 478 aa28.05■■■□□ 2.08
HERC4-212ENST00000505760 EVPLQ92817 2033 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 NID2Q14112 1375 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 IGLV3-22A0A075B6J6 115 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 DGKIO75912 1065 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 RPS6KB1P23443 525 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 KLRC1P26715 233 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 SETQ01105 290 aaPredicted RBP28.04■■■□□ 2.08
HERC4-212ENST00000505760 CCDC60Q8IWA6 550 aaPredicted RBP28.04■■■□□ 2.08
HERC4-212ENST00000505760 CRYGNQ8WXF5 182 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 CLP1Q92989 425 aaKnown RBP28.04■■■□□ 2.08
HERC4-212ENST00000505760 PHKBQ93100 1093 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 ZNF689Q96CS4 500 aaPredicted RBP28.04■■■□□ 2.08
HERC4-212ENST00000505760 TCEAL9Q9UHQ7 104 aa28.04■■■□□ 2.08
HERC4-212ENST00000505760 KDM3AQ9Y4C1 1321 aa28.03■■■□□ 2.08
HERC4-212ENST00000505760 DHX15O43143 795 aaKnown RBP28.03■■■□□ 2.08
HERC4-212ENST00000505760 REC8O95072 547 aa28.03■■■□□ 2.08
HERC4-212ENST00000505760 PSMA5P28066 241 aa28.03■■■□□ 2.08
HERC4-212ENST00000505760 PKN1Q16512 942 aa28.03■■■□□ 2.08
HERC4-212ENST00000505760 SWSAP1Q6NVH7 229 aa28.03■■■□□ 2.08
HERC4-212ENST00000505760 EP400NLQ6ZTU2 488 aa28.03■■■□□ 2.08
HERC4-212ENST00000505760 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.03■■■□□ 2.08
HERC4-212ENST00000505760 TBC1D22BQ9NU19 505 aa28.03■■■□□ 2.08
HERC4-212ENST00000505760 GINS2Q9Y248 185 aa28.03■■■□□ 2.08
HERC4-212ENST00000505760 COL1A2P08123 1366 aa28.02■■■□□ 2.08
HERC4-212ENST00000505760 LINC00271P0C7V0 271 aa28.02■■■□□ 2.08
HERC4-212ENST00000505760 ZNF484Q5JVG2 852 aa28.02■■■□□ 2.08
HERC4-212ENST00000505760 PTCRAQ6ISU1 281 aaPredicted RBP28.02■■■□□ 2.08
HERC4-212ENST00000505760 RTN4RL1Q86UN2 441 aaPredicted RBP28.02■■■□□ 2.08
HERC4-212ENST00000505760 NPAS4Q8IUM7 802 aa28.02■■■□□ 2.08
HERC4-212ENST00000505760 CKAP2LQ8IYA6 745 aa28.02■■■□□ 2.08
HERC4-212ENST00000505760 FBXL16Q8N461 479 aa28.02■■■□□ 2.08
HERC4-212ENST00000505760 BICD2Q8TD16 824 aa28.02■■■□□ 2.08
HERC4-212ENST00000505760 LMAN2LQ9H0V9 348 aa28.02■■■□□ 2.08
HERC4-212ENST00000505760 ATG2AQ2TAZ0 1938 aa28.01■■■□□ 2.07
HERC4-212ENST00000505760 H3BQ06 376 aaPredicted RBP28.01■■■□□ 2.07
HERC4-212ENST00000505760 ADAMTS3O15072 1205 aa28.01■■■□□ 2.07
HERC4-212ENST00000505760 STAG3L1P0CL83 205 aa28.01■■■□□ 2.07
HERC4-212ENST00000505760 PUS10Q3MIT2 529 aaKnown RBP28.01■■■□□ 2.07
HERC4-212ENST00000505760 CCDC148Q8NFR7 591 aa28.01■■■□□ 2.07
HERC4-212ENST00000505760 PABPC5Q96DU9 382 aaKnown RBP28.01■■■□□ 2.07
HERC4-212ENST00000505760 GRM6O15303 877 aa28■■■□□ 2.07
HERC4-212ENST00000505760 PPFIA3O75145 1194 aa28■■■□□ 2.07
HERC4-212ENST00000505760 NFX1Q12986 1120 aaKnown RBP28■■■□□ 2.07
HERC4-212ENST00000505760 TMEM266Q2M3C6 531 aa28■■■□□ 2.07
HERC4-212ENST00000505760 PRR16Q569H4 304 aa28■■■□□ 2.07
HERC4-212ENST00000505760 ZNF746Q6NUN9 644 aaPredicted RBP28■■■□□ 2.07
HERC4-212ENST00000505760 NEK9Q8TD19 979 aa28■■■□□ 2.07
HERC4-212ENST00000505760 PLVAPQ9BX97 442 aa28■■■□□ 2.07
HERC4-212ENST00000505760 SLC26A6Q9BXS9 759 aa28■■■□□ 2.07
HERC4-212ENST00000505760 RNF26Q9BY78 433 aaPredicted RBP28■■■□□ 2.07
HERC4-212ENST00000505760 AGXT2Q9BYV1 514 aa28■■■□□ 2.07
HERC4-212ENST00000505760 EPHX3Q9H6B9 360 aa28■■■□□ 2.07
HERC4-212ENST00000505760 FAM178BQ8IXR5 827 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 841.6 ms