RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 GTF3C6Q969F1 213 aa28.72■■■□□ 2.19
PVT1-201ENST00000504719 RAD9AQ99638 391 aa28.72■■■□□ 2.19
PVT1-201ENST00000504719 BACH2Q9BYV9 841 aa28.72■■■□□ 2.19
PVT1-201ENST00000504719 PCDHA2Q9Y5H9 948 aa28.72■■■□□ 2.19
PVT1-201ENST00000504719 EVPLQ92817 2033 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 LCHNA4D1U4 455 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 MSH4O15457 936 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 HBP1O60381 514 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 DTNBO60941 627 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 IGFBP4P22692 258 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 PDXDC2PQ6P474 469 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 USP38Q8NB14 1042 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 ATP8B4Q8TF62 1192 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 TBC1D32Q96NH3 1257 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 IFIH1Q9BYX4 1025 aaKnown RBP28.71■■■□□ 2.19
PVT1-201ENST00000504719 CERS4Q9HA82 394 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 LIMCH1Q9UPQ0 1083 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 CDY2AQ9Y6F7 541 aa28.71■■■□□ 2.19
PVT1-201ENST00000504719 CTDNEP1O95476 244 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 GHRP10912 638 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 ATP4AP20648 1035 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 MRPS6P82932 125 aaKnown RBP28.7■■■□□ 2.18
PVT1-201ENST00000504719 RABEP1Q15276 862 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 FAM117BQ6P1L5 589 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 MTHFD1LQ6UB35 978 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 MYOCDQ8IZQ8 938 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 PHF20Q9BVI0 1012 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 FAM49AQ9H0Q0 323 aaPredicted RBP28.7■■■□□ 2.18
PVT1-201ENST00000504719 TCEAL9Q9UHQ7 104 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 KCNJ14Q9UNX9 436 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 PCDHA10Q9Y5I2 948 aa28.7■■■□□ 2.18
PVT1-201ENST00000504719 MAFBQ9Y5Q3 323 aaPredicted RBP28.7■■■□□ 2.18
PVT1-201ENST00000504719 EPOPA6NHQ4 379 aa28.69■■■□□ 2.18
PVT1-201ENST00000504719 PSAPP07602 524 aa28.69■■■□□ 2.18
PVT1-201ENST00000504719 LPIN1Q14693 890 aa28.69■■■□□ 2.18
PVT1-201ENST00000504719 Q4G0T1 1027 aa28.69■■■□□ 2.18
PVT1-201ENST00000504719 PRUNE2Q8WUY3 3088 aa28.69■■■□□ 2.18
PVT1-201ENST00000504719 UNC80Q8N2C7 3258 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 COL1A2P08123 1366 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 CYP3A7-CYP3A51PA0A087WV96 503 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 SMIM35A0A1B0GVV1 85 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.68■■■□□ 2.18
PVT1-201ENST00000504719 RFXAPO00287 272 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 CYP3A7P24462 503 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 FBXO47Q5MNV8 452 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 ARNTL2Q8WYA1 636 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 SLC5A5Q92911 643 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 RIT2Q99578 217 aa28.68■■■□□ 2.18
PVT1-201ENST00000504719 KLRC1P26715 233 aa28.67■■■□□ 2.18
PVT1-201ENST00000504719 NONOQ15233 471 aaKnown RBP eCLIP28.67■■■□□ 2.18
PVT1-201ENST00000504719 ZNF484Q5JVG2 852 aa28.67■■■□□ 2.18
PVT1-201ENST00000504719 IER5Q5VY09 327 aa28.67■■■□□ 2.18
PVT1-201ENST00000504719 KRT25Q7Z3Z0 450 aa28.67■■■□□ 2.18
PVT1-201ENST00000504719 SPRED2Q7Z698 418 aa28.67■■■□□ 2.18
PVT1-201ENST00000504719 PPM1EQ8WY54 764 aa28.67■■■□□ 2.18
PVT1-201ENST00000504719 TOP1MTQ969P6 601 aa28.67■■■□□ 2.18
PVT1-201ENST00000504719 INSL6Q9Y581 213 aa28.67■■■□□ 2.18
PVT1-201ENST00000504719 TDP2O95551 362 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 XBP1P17861 261 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 HTRA4P83105 476 aaPredicted RBP28.66■■■□□ 2.18
PVT1-201ENST00000504719 MOXD1Q6UVY6 613 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 TSHZ1Q6ZSZ6 1077 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 NME8Q8N427 588 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 BBXQ8WY36 941 aaPredicted RBP28.66■■■□□ 2.18
PVT1-201ENST00000504719 MBOAT7Q96N66 472 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 ORC3Q9UBD5 711 aaPredicted RBP28.66■■■□□ 2.18
PVT1-201ENST00000504719 GABBR1Q9UBS5 961 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 SAMM50Q9Y512 469 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 TRPV2Q9Y5S1 764 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 SQORQ9Y6N5 450 aa28.66■■■□□ 2.18
PVT1-201ENST00000504719 LINC01553A4QN01 128 aa28.65■■■□□ 2.18
PVT1-201ENST00000504719 WDR64B1ANS9 1081 aa28.65■■■□□ 2.18
PVT1-201ENST00000504719 ZBTB42B2RXF5 422 aa28.65■■■□□ 2.18
PVT1-201ENST00000504719 POU3F3P20264 500 aaPredicted RBP28.65■■■□□ 2.18
PVT1-201ENST00000504719 CKAP2LQ8IYA6 745 aa28.65■■■□□ 2.18
PVT1-201ENST00000504719 TEKT3Q9BXF9 490 aa28.65■■■□□ 2.18
PVT1-201ENST00000504719 DISC1Q9NRI5 854 aa28.65■■■□□ 2.18
PVT1-201ENST00000504719 GJB4Q9NTQ9 266 aa28.65■■■□□ 2.18
PVT1-201ENST00000504719 IGSF9BQ9UPX0 1349 aa28.65■■■□□ 2.18
PVT1-201ENST00000504719 M0QZ92 97 aa28.64■■■□□ 2.18
PVT1-201ENST00000504719 GAS7O60861 476 aa28.64■■■□□ 2.18
PVT1-201ENST00000504719 FDPSP14324 419 aaKnown RBP28.64■■■□□ 2.18
PVT1-201ENST00000504719 TMEM62Q0P6H9 643 aa28.64■■■□□ 2.18
PVT1-201ENST00000504719 ST3GAL1Q11201 340 aa28.64■■■□□ 2.18
PVT1-201ENST00000504719 INF2Q27J81 1249 aa28.64■■■□□ 2.18
PVT1-201ENST00000504719 LRCH2Q5VUJ6 765 aa28.64■■■□□ 2.18
PVT1-201ENST00000504719 NSUN7Q8NE18 718 aaKnown RBP28.64■■■□□ 2.18
PVT1-201ENST00000504719 WASF1Q92558 559 aa28.64■■■□□ 2.18
PVT1-201ENST00000504719 GJA10Q969M2 543 aa28.64■■■□□ 2.18
PVT1-201ENST00000504719 COL4A4P53420 1690 aaPredicted RBP28.64■■■□□ 2.17
PVT1-201ENST00000504719 DLL1O00548 723 aa28.63■■■□□ 2.17
PVT1-201ENST00000504719 ST18O60284 1047 aa28.63■■■□□ 2.17
PVT1-201ENST00000504719 PSMD10O75832 226 aa28.63■■■□□ 2.17
PVT1-201ENST00000504719 ERVK-21P61565 698 aa28.63■■■□□ 2.17
PVT1-201ENST00000504719 CCDC85BQ15834 202 aaPredicted RBP28.63■■■□□ 2.17
PVT1-201ENST00000504719 SP7Q8TDD2 431 aaPredicted RBP28.63■■■□□ 2.17
PVT1-201ENST00000504719 ZSCAN31Q96LW9 406 aaPredicted RBP28.63■■■□□ 2.17
PVT1-201ENST00000504719 TGS1Q96RS0 853 aaKnown RBP28.63■■■□□ 2.17
PVT1-201ENST00000504719 CELF4Q9BZC1 486 aaKnown RBP28.63■■■□□ 2.17
PVT1-201ENST00000504719 UNC45AQ9H3U1 944 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms