RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PSAPP07602 524 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 FDPSP14324 419 aaKnown RBP16.12■□□□□ 0.17
HOXC9-202ENST00000504557 KRT76Q01546 638 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 ZNF746Q6NUN9 644 aaPredicted RBP16.12■□□□□ 0.17
HOXC9-202ENST00000504557 TAF2Q6P1X5 1199 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
HOXC9-202ENST00000504557 MYOCDQ8IZQ8 938 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 SLC17A8Q8NDX2 589 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 NSUN7Q8NE18 718 aaKnown RBP16.12■□□□□ 0.17
HOXC9-202ENST00000504557 SEPT8Q92599 483 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
HOXC9-202ENST00000504557 PPP1R16BQ96T49 567 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 TEKT3Q9BXF9 490 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 PCDHA10Q9Y5I2 948 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 CDY2AQ9Y6F7 541 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 ABHD14A-ACY1A0A1B0GW23 586 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 MBLAC1A4D2B0 266 aaPredicted RBP16.11■□□□□ 0.17
HOXC9-202ENST00000504557 FAM205CA6NFA0 338 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 CAND2O75155 1236 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 UPP2O95045 317 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 IBSPP21815 317 aaPredicted RBP16.11■□□□□ 0.17
HOXC9-202ENST00000504557 IGFBP4P22692 258 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 GUCY1B3Q02153 619 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 NR5A1Q13285 461 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 MAFAQ8NHW3 353 aaPredicted RBP16.11■□□□□ 0.17
HOXC9-202ENST00000504557 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 GAS2L1Q99501 681 aaPredicted RBP16.11■□□□□ 0.17
HOXC9-202ENST00000504557 UNC45AQ9H3U1 944 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 DDX25Q9UHL0 483 aaKnown RBP16.11■□□□□ 0.17
HOXC9-202ENST00000504557 LIMCH1Q9UPQ0 1083 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 GINS2Q9Y248 185 aa16.11■□□□□ 0.17
HOXC9-202ENST00000504557 IGKV6D-21A0A0A0MT36 114 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 WDR64B1ANS9 1081 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 M0QZ92 97 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 SLC37A4O43826 429 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 MARCH6O60337 910 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 HBP1O60381 514 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 CCNT1O60563 726 aaKnown RBP16.1■□□□□ 0.17
HOXC9-202ENST00000504557 ATP4AP20648 1035 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 KLRC1P26715 233 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 KRT2P35908 639 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 SLC26A2P50443 739 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 MRPS6P82932 125 aaKnown RBP16.1■□□□□ 0.17
HOXC9-202ENST00000504557 ST3GAL1Q11201 340 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 TRIM29Q14134 588 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 PLEKHG4Q58EX7 1191 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
HOXC9-202ENST00000504557 MTHFD1LQ6UB35 978 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 MIER3Q7Z3K6 550 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 NEK8Q86SG6 692 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 SMAP1Q8IYB5 467 aaPredicted RBP16.1■□□□□ 0.17
HOXC9-202ENST00000504557 PHOSPHO2Q8TCD6 241 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 SLC5A5Q92911 643 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 IFIH1Q9BYX4 1025 aaKnown RBP16.1■□□□□ 0.17
HOXC9-202ENST00000504557 BRMS1Q9HCU9 246 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 DISC1Q9NRI5 854 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 CDH23Q9H251 3354 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 NLRC5Q86WI3 1866 aa16.1■□□□□ 0.17
HOXC9-202ENST00000504557 LCHNA4D1U4 455 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 RFXAPO00287 272 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 ARHGEF15O94989 841 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 AMHP03971 560 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 UGCGQ16739 394 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 Q4G0T1 1027 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 SPRED2Q7Z698 418 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 MICALL1Q8N3F8 863 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 METTL13Q8N6R0 699 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 ARNTL2Q8WYA1 636 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 RIT2Q99578 217 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 MTUS1Q9ULD2 1270 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
HOXC9-202ENST00000504557 COL4A4P53420 1690 aaPredicted RBP16.08■□□□□ 0.17
HOXC9-202ENST00000504557 EFCAB14O75071 495 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 PRKCEQ02156 737 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 MGAT3Q09327 533 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 LPIN1Q14693 890 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 CCDC85BQ15834 202 aaPredicted RBP16.08■□□□□ 0.16
HOXC9-202ENST00000504557 FAM26DQ5JW98 314 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 IER5Q5VY09 327 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 KRT40Q6A162 431 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
HOXC9-202ENST00000504557 BBXQ8WY36 941 aaPredicted RBP16.08■□□□□ 0.16
HOXC9-202ENST00000504557 KIF2CQ99661 725 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 MAFBQ9Y5Q3 323 aaPredicted RBP16.08■□□□□ 0.16
HOXC9-202ENST00000504557 TRPV2Q9Y5S1 764 aa16.08■□□□□ 0.16
HOXC9-202ENST00000504557 CYP3A7-CYP3A51PA0A087WV96 503 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 BTBD18B2RXH4 712 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 PSMD10O75832 226 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 ATP2B1P20020 1258 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 CYP3A7P24462 503 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 CD52P31358 61 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 JAK3P52333 1124 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 ZNF484Q5JVG2 852 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 FBXO47Q5MNV8 452 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 ETNPPLQ8TBG4 499 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 SH2D3AQ9BRG2 576 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
HOXC9-202ENST00000504557 IGSF9BQ9UPX0 1349 aa16.07■□□□□ 0.16
HOXC9-202ENST00000504557 COL1A2P08123 1366 aa16.06■□□□□ 0.16
HOXC9-202ENST00000504557 SMIM35A0A1B0GVV1 85 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms