RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 NCAPGQ9BPX3 1015 aa7.04□□□□□ -1.28
COPB2-204ENST00000504295 NACAP1Q9BZK3 213 aa7.04□□□□□ -1.28
COPB2-204ENST00000504295 VPS18Q9P253 973 aa7.04□□□□□ -1.28
COPB2-204ENST00000504295 F8VZ95 297 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 EIF3DO15371 548 aaKnown RBP eCLIP7.03□□□□□ -1.28
COPB2-204ENST00000504295 EIF3JO75822 258 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 WFS1O76024 890 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 CYP11B2P19099 503 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 PRDX5P30044 214 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 FLT3P36888 993 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 MDH1P40925 334 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 FOSBP53539 338 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 QPCTQ16769 361 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 KIAA0753Q2KHM9 967 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 UBAP2Q5T6F2 1119 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 CHADLQ6NUI6 762 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 PIK3AP1Q6ZUJ8 805 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 RTKN2Q8IZC4 609 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 SH3RF3Q8TEJ3 882 aaPredicted RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 MZB1Q8WU39 189 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 DDX1Q92499 740 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 ZKSCAN4Q969J2 545 aaPredicted RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 VPS33BQ9H267 617 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 SLITRK6Q9H5Y7 841 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 PUF60Q9UHX1 559 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 FAM169AQ9Y6X4 670 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 TRIP11Q15643 1979 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 TRAFD1O14545 582 aaPredicted RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 HSD17B3P37058 310 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 CCT6AP40227 531 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 GYG1P46976 350 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 CARSP49589 748 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 PTP4A2Q12974 167 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 COASYQ13057 564 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 ACVR2BQ13705 512 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 ZNF268Q14587 947 aaPredicted RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 MCTP2Q6DN12 878 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 C15orf39Q6ZRI6 1047 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 GSPT2Q8IYD1 628 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 GMCL1P1Q8NEA9 526 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 ZNF473Q8WTR7 871 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 SECISBP2LQ93073 1101 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 SLC35C1Q96A29 364 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 DHRS4Q9BTZ2 278 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 PHACTR1Q9C0D0 580 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 KIAA1024Q9UPX6 916 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 CNTN6Q9UQ52 1028 aa7.03□□□□□ -1.28
COPB2-204ENST00000504295 LUC7L2Q9Y383 392 aaKnown RBP7.03□□□□□ -1.28
COPB2-204ENST00000504295 USP17L12C9JPN9 530 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 USP17L21D6R901 530 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 RAD51CO43502 376 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 CAPNS1P04632 268 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 KLRC1P26715 233 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 EIF4A3P38919 411 aaKnown RBP7.02□□□□□ -1.28
COPB2-204ENST00000504295 UBXN1Q04323 297 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 KLF1Q13351 362 aaPredicted RBP7.02□□□□□ -1.28
COPB2-204ENST00000504295 GIT2Q14161 759 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 ITIH4Q14624 930 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 TAZQ16635 292 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 PNMA1Q8ND90 353 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 SH3TC2Q8TF17 1288 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 TAF1DQ9H5J8 278 aaPredicted RBP7.02□□□□□ -1.28
COPB2-204ENST00000504295 ZNHIT6Q9NWK9 470 aaKnown RBP7.02□□□□□ -1.28
COPB2-204ENST00000504295 ARHGAP28Q9P2N2 729 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 NOCTQ9UK39 431 aaKnown RBP7.02□□□□□ -1.28
COPB2-204ENST00000504295 BCS1LQ9Y276 419 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 DIS3Q9Y2L1 958 aaKnown RBP7.02□□□□□ -1.28
COPB2-204ENST00000504295 LEMD3Q9Y2U8 911 aa7.02□□□□□ -1.28
COPB2-204ENST00000504295 A0A087X0T9 212 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 KRT86O43790 486 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 ITGBL1O95965 494 aaPredicted RBP7.02□□□□□ -1.29
COPB2-204ENST00000504295 FAM228BP0C875 321 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 CYP7A1P22680 504 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 PON1P27169 355 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 BIRC3Q13489 604 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 SART3Q15020 963 aaKnown RBP7.02□□□□□ -1.29
COPB2-204ENST00000504295 RRAGBQ5VZM2 374 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 SH2D5Q6ZV89 423 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 POLR3CQ9BUI4 534 aaPredicted RBP7.02□□□□□ -1.29
COPB2-204ENST00000504295 VPS16Q9H269 839 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 JMJD4Q9H9V9 463 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 DDX20Q9UHI6 824 aaKnown RBP7.02□□□□□ -1.29
COPB2-204ENST00000504295 COG5Q9UP83 839 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 DDX3XO00571 662 aaKnown RBP eCLIP7.02□□□□□ -1.292e-11■■□□□ 12.7
COPB2-204ENST00000504295 ENC1O14682 589 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 LIN7AO14910 233 aaPredicted RBP7.02□□□□□ -1.29
COPB2-204ENST00000504295 IDH1O75874 414 aaKnown RBP7.02□□□□□ -1.29
COPB2-204ENST00000504295 MAPTP10636 758 aaKnown RBP7.02□□□□□ -1.29
COPB2-204ENST00000504295 GNAZP19086 355 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 CASP5P51878 434 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 TRIM29Q14134 588 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 EPC2Q52LR7 807 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 CABP7Q86V35 215 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 FAM114A1Q8IWE2 563 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 SYT2Q8N9I0 419 aaPredicted RBP7.02□□□□□ -1.29
COPB2-204ENST00000504295 CCDC148Q8NFR7 591 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 NLGN2Q8NFZ4 835 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 TBC1D16Q8TBP0 767 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 ART4Q93070 314 aa7.02□□□□□ -1.29
COPB2-204ENST00000504295 HSD17B14Q9BPX1 270 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms