RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 GCOM1H8Y6P7 765 aaPredicted RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 KIAA0754O94854 1291 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 FAM107AO95990 144 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 MYZAPP0CAP1 466 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 GUCY2CP25092 1073 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 GUCY2FP51841 1108 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 ARID5AQ03989 594 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 DRP2Q13474 957 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 EPHA7Q15375 998 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 NFIL3Q16649 462 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 Q4G0T1 1027 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 NAA35Q5VZE5 725 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 MAATS1Q7Z4T9 603 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 FMNL3Q8IVF7 1028 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 CNPY4Q8N129 248 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 PRPF38AQ8NAV1 312 aaKnown RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 RBM17Q96I25 401 aaKnown RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 CCDC17Q96LX7 622 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 GPR101Q96P66 508 aaPredicted RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 TBC1D7Q9P0N9 293 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 DIS3Q9Y2L1 958 aaKnown RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 QSER1Q2KHR3 1735 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 MED24O75448 989 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 KRT18P05783 430 aaKnown RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 ADRA2BP18089 450 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 SHMT1P34896 483 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 LIG3P49916 1009 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 PPP2R5EQ16537 467 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 AGBL2Q5U5Z8 902 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 PRR5LQ6MZQ0 368 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 ETNPPLQ8TBG4 499 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 MKL1Q969V6 931 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 ANO3Q9BYT9 981 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 TYW1Q9NV66 732 aaKnown RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 PACSIN2Q9UNF0 486 aaPredicted RBP16.37■□□□□ 0.21
SNF8-203ENST00000504000 DNM3Q9UQ16 869 aa16.37■□□□□ 0.21
SNF8-203ENST00000504000 TAF1LQ8IZX4 1826 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 USP17L10C9JJH3 530 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 SART1O43290 800 aaKnown RBP16.36■□□□□ 0.21
SNF8-203ENST00000504000 H2AFZP0C0S5 128 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 FERP16591 822 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 SLC9A1P19634 815 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 HSD17B3P37058 310 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 ATP1A2P50993 1020 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 SKIDA1Q1XH10 827 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 CEP85LQ5SZL2 805 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 TTC19Q6DKK2 380 aaPredicted RBP16.36■□□□□ 0.21
SNF8-203ENST00000504000 H2AFVQ71UI9 128 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 NLRP14Q86W24 1093 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 CATSPER3Q86XQ3 398 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 GPIHBP1Q8IV16 184 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 TEX2Q8IWB9 1127 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 OTUD6BQ8N6M0 293 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 CCDC26Q8TAB7 109 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 ZNF473Q8WTR7 871 aaKnown RBP16.36■□□□□ 0.21
SNF8-203ENST00000504000 CCT8L2Q96SF2 557 aa16.36■□□□□ 0.21
SNF8-203ENST00000504000 NPHP3-ACAD11A0A0J9YXS1 232 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 HOXD13P35453 343 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 FNTAP49354 379 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 GTF2A1P52655 376 aaPredicted RBP16.35■□□□□ 0.21
SNF8-203ENST00000504000 GUCY1A3Q02108 690 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 CLUL1Q15846 466 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 VPS72Q15906 364 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 SLC15A2Q16348 729 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 FAM98CQ17RN3 349 aaKnown RBP16.35■□□□□ 0.21
SNF8-203ENST00000504000 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 ARMC9Q7Z3E5 817 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 KLHL7Q8IXQ5 586 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 METTL13Q8N6R0 699 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
SNF8-203ENST00000504000 MYCBPAPQ8TBZ2 947 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 KAT2BQ92831 832 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 HES6Q96HZ4 224 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 FAM20AQ96MK3 541 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 OLFML3Q9NRN5 406 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 SAMM50Q9Y512 469 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 CEP104O60308 925 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 PAEPP09466 180 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 HLTFQ14527 1009 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNF8-203ENST00000504000 TRADDQ15628 312 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 SLC51AQ86UW1 340 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 DCAF4Q8WV16 495 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 KANSL2Q9H9L4 492 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 SIX2Q9NPC8 291 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 FAM114A2Q9NRY5 505 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 SLC12A6Q9UHW9 1150 aa16.35■□□□□ 0.21
SNF8-203ENST00000504000 NOC2LQ9Y3T9 749 aaKnown RBP16.35■□□□□ 0.21
SNF8-203ENST00000504000 LY75O60449 1722 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 AKAP3O75969 853 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 FOSP01100 380 aaPredicted RBP16.34■□□□□ 0.21
SNF8-203ENST00000504000 SPATA31C1P0DKV0 1188 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 ACTN1P12814 892 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 CASP5P51878 434 aa16.34■□□□□ 0.21
SNF8-203ENST00000504000 UAP1Q16222 522 aaPredicted RBP16.34■□□□□ 0.21
SNF8-203ENST00000504000 C6orf89Q6UWU4 347 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms