RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 TRAPPC12Q8WVT3 735 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 BBXQ8WY36 941 aaPredicted RBP8.22□□□□□ -1.09
USP46-203ENST00000502443 WNT8BQ93098 351 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 ZBTB10Q96DT7 871 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 INTS4Q96HW7 963 aaKnown RBP8.22□□□□□ -1.09
USP46-203ENST00000502443 TTC12Q9H892 705 aaPredicted RBP8.22□□□□□ -1.09
USP46-203ENST00000502443 IL23AQ9NPF7 189 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 VAV3Q9UKW4 847 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 MBLAC1A4D2B0 266 aaPredicted RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 VPS37CA5D8V6 355 aaPredicted RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 ZNF862O60290 1169 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 PARNO95453 639 aaKnown RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 CTSHP09668 335 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 KLRC1P26715 233 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 RFC2P35250 354 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 TOB1P50616 345 aaPredicted RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 PRKCEQ02156 737 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 RBL2Q08999 1139 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 ORC2Q13416 577 aaPredicted RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 NBR1Q14596 966 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 TRIM71Q2Q1W2 868 aaKnown RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 ZNF484Q5JVG2 852 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 MARCH8Q5T0T0 291 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 NCAPH2Q6IBW4 605 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 TAF2Q6P1X5 1199 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 PSRC1Q6PGN9 363 aaPredicted RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 RUFY4Q6ZNE9 571 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 ZNF365Q70YC5 407 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 C16orf59Q7L2K0 433 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 BANK1Q8NDB2 785 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 DNAJB3Q8WWF6 145 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 FAM167AQ96KS9 214 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 RNPC3Q96LT9 517 aaKnown RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 MTMR9Q96QG7 549 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.21□□□□□ -1.1
USP46-203ENST00000502443 FTOQ9C0B1 505 aaKnown RBP eCLIP8.21□□□□□ -1.1
USP46-203ENST00000502443 FAM49AQ9H0Q0 323 aaPredicted RBP8.21□□□□□ -1.1
USP46-203ENST00000502443 TMEM60Q9H2L4 133 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 NRBP2Q9NSY0 501 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 PCDHB6Q9Y5E3 794 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 IGSF9BQ9UPX0 1349 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 TANC1Q9C0D5 1861 aa8.21□□□□□ -1.1
USP46-203ENST00000502443 EVPLQ92817 2033 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 RSPH10B2B2RC85 870 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 ZBTB42B2RXF5 422 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 CAND2O75155 1236 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 FGBP02675 491 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 OATP04181 439 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 PFKMP08237 780 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 OR52Z1P0C646 297 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 RSPH10BP0C881 870 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 SYT1P21579 422 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 TECP42680 631 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 QARSP47897 775 aaKnown RBP8.2□□□□□ -1.1
USP46-203ENST00000502443 PSMC5P62195 406 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 CYP4A11Q02928 519 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 SPIRE1Q08AE8 756 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 EPHA7Q15375 998 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 RILPL1Q5EBL4 403 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 TMEM240Q5SV17 173 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 MTHFD1LQ6UB35 978 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 OTOP2Q7RTS6 562 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 RSPH3Q86UC2 560 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 METTL13Q8N6R0 699 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 SPRYD3Q8NCJ5 442 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 RGL1Q9NZL6 768 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 SEPT9Q9UHD8 586 aaPredicted RBP8.2□□□□□ -1.1
USP46-203ENST00000502443 CEP131Q9UPN4 1083 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 RBM19Q9Y4C8 960 aaKnown RBP8.2□□□□□ -1.1
USP46-203ENST00000502443 PCDHA2Q9Y5H9 948 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 COL1A2P08123 1366 aa8.2□□□□□ -1.1
USP46-203ENST00000502443 SMIM35A0A1B0GVV1 85 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 TMEM150BA6NC51 233 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 POTEMA6NI47 508 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 DDX11L8A8MPP1 907 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 M0QZ92 97 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 DKC1O60832 514 aaKnown RBP eCLIP8.19□□□□□ -1.1
USP46-203ENST00000502443 NBNO60934 754 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 CHRNA1P02708 482 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 RPLP2P05387 115 aaKnown RBP8.19□□□□□ -1.1
USP46-203ENST00000502443 P4HBP07237 508 aaKnown RBP8.19□□□□□ -1.1
USP46-203ENST00000502443 ACTN1P12814 892 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 TMEM62Q0P6H9 643 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 PTGDRQ13258 359 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 CTTNQ14247 550 aaKnown RBP8.19□□□□□ -1.1
USP46-203ENST00000502443 GPNMBQ14956 572 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 TMEM266Q2M3C6 531 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 LRIT3Q3SXY7 679 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 MTERF2Q49AM1 385 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 XKR3Q5GH77 459 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 TRAF7Q6Q0C0 670 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 BRAPQ7Z569 592 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 RPAINQ86UA6 219 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 FERMT3Q86UX7 667 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 TPH2Q8IWU9 490 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 TET1Q8NFU7 2136 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 HERVK_113Q902F9 699 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 VWCEQ96DN2 955 aa8.19□□□□□ -1.1
USP46-203ENST00000502443 DYDC2Q96IM9 177 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms