RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, human

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTN-208	ENST00000498223	FAM13B	Q9NYF5	915 aa		12.82	□□□□□ -0.36
CTTN-208	ENST00000498223	CCDC39	Q9UFE4	941 aa		12.82	□□□□□ -0.36
CTTN-208	ENST00000498223	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.82	□□□□□ -0.36
CTTN-208	ENST00000498223	KDM3A	Q9Y4C1	1321 aa		12.82	□□□□□ -0.36
CTTN-208	ENST00000498223	IGKV6D-21	A0A0A0MT36	114 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223		A0A1W2PQ45	241 aa	Predicted RBP	12.81	□□□□□ -0.36
CTTN-208	ENST00000498223		A0A1W2PQY0	241 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	POTEB3	A0JP26	581 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	GOLGA6L22	H0YM25	854 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	MED24	O75448	989 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	HOXD8	P13378	290 aa	Predicted RBP	12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	RPA1	P27694	616 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	SLC26A2	P50443	739 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	PRKCE	Q02156	737 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	UGCG	Q16739	394 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	POTEB	Q6S5H4	581 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	CATSPER3	Q86XQ3	398 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	C7orf31	Q8N865	590 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	PPP1R13L	Q8WUF5	828 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	SYMPK	Q92797	1274 aa	Known RBP	12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	EPSTI1	Q96J88	318 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	FAM167A	Q96KS9	214 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	C16orf70	Q9BSU1	422 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	ZSWIM4	Q9H7M6	989 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	PHF24	Q9UPV7	400 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223	IGSF9B	Q9UPX0	1349 aa		12.81	□□□□□ -0.36
CTTN-208	ENST00000498223		A0A087WWV3	80 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	SLITRK3	O94933	977 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	OAT	P04181	439 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	ATN1	P54259	1190 aa	Predicted RBP	12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	IGBP1	P78318	339 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	ITGA7	Q13683	1181 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	KARS	Q15046	597 aa	Known RBP	12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	PLCB4	Q15147	1175 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	NBPF20	Q3BBV1	942 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	ADAL	Q6DHV7	355 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	POTEG	Q6S5H5	508 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	OTUD6A	Q7L8S5	288 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	ZNF579	Q8NAF0	562 aa	Known RBP	12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	AFAP1L1	Q8TED9	768 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	DIS3L	Q8TF46	1054 aa	Known RBP	12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	KAT2B	Q92831	832 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	PANK2	Q9BZ23	570 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	NT5C3A	Q9H0P0	336 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	RNPEP	Q9H4A4	650 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	C11orf49	Q9H6J7	331 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	DDX19A	Q9NUU7	478 aa	Known RBP	12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	KIAA1024	Q9UPX6	916 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	TRIOBP	Q9H2D6	2365 aa		12.8	□□□□□ -0.36
CTTN-208	ENST00000498223	RANBP2	P49792	3224 aa	Known RBP	12.8	□□□□□ -0.36
CTTN-208	ENST00000498223		A0A0U1RQG5	324 aa	Predicted RBP	12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	HBP1	O60381	514 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	PRPF40A	O75400	957 aa	Known RBP	12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	F2	P00734	622 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	SSB	P05455	408 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	SPATA31C1	P0DKV0	1188 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	SMIM10L2A	P0DMW4	78 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	SMIM10L2B	P0DMW5	78 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	MUT	P22033	750 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	PPFIA1	Q13136	1202 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	MTERF2	Q49AM1	385 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	XKR9	Q5GH70	373 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	XKR3	Q5GH77	459 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	RRAGB	Q5VZM2	374 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	SHC4	Q6S5L8	630 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	USP49	Q70CQ1	688 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	C4orf19	Q8IY42	314 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	PDILT	Q8N807	584 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	FSIP1	Q8NA03	581 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	PIGO	Q8TEQ8	1089 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	ATP8B4	Q8TF62	1192 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	BBX	Q8WY36	941 aa	Predicted RBP	12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	NACC1	Q96RE7	527 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	HSD17B14	Q9BPX1	270 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	MMTAG2	Q9BU76	263 aa	Known RBP	12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	CCSER1	Q9C0I3	900 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	PRO3102	Q9H379	93 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	DNM3	Q9UQ16	869 aa		12.79	□□□□□ -0.36
CTTN-208	ENST00000498223	ARHGEF35	A5YM69	484 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	SLC26A4	O43511	780 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	ZNF862	O60290	1169 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	INSRR	P14616	1297 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	ATP4A	P20648	1035 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	YWHAB	P31946	246 aa	Known RBP	12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	STAT6	P42226	847 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	MNX1	P50219	401 aa	Predicted RBP	12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	GRB10	Q13322	594 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	DHX8	Q14562	1220 aa	Known RBP	12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	RESP18	Q5W5W9	173 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	PLA2G4F	Q68DD2	849 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	CCDC73	Q6ZRK6	1079 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	MRPS27	Q92552	414 aa	Known RBP	12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	CEP170P1	Q96L14	293 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	NOD1	Q9Y239	953 aa		12.78	□□□□□ -0.36
CTTN-208	ENST00000498223	ALPK3	Q96L96	1907 aa		12.78	□□□□□ -0.36

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