RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	SCNN1B	P51168	640 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	LACTB2	Q53H82	288 aa	Predicted RBP	11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MEI1	Q5TIA1	1274 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MIGA2	Q7L4E1	593 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MREG	Q8N565	214 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CNBD1	Q8NA66	436 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SNX29	Q8TEQ0	813 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ERP27	Q96DN0	273 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ACSBG1	Q96GR2	724 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	DDX50	Q9BQ39	737 aa	Known RBP	11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RAB17	Q9H0T7	212 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	FAM114A2	Q9NRY5	505 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SLC5A4	Q9NY91	659 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	NKIRAS1	Q9NYS0	192 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ADAM22	Q9P0K1	906 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ABCC12	Q96J65	1359 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	POTEM	A6NI47	508 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CYP2D6	P10635	497 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	YY1	P25490	414 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	KCNJ1	P48048	391 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PPP1R15B	Q5SWA1	713 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	AADACL2	Q6P093	401 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TAOK1	Q7L7X3	1001 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SPATA21	Q7Z572	469 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SRRM1	Q8IYB3	904 aa	Known RBP	11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	KIAA0895	Q8NCT3	520 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RUBCN	Q92622	972 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MKNK2	Q9HBH9	465 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RHBDL2	Q9NX52	303 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GGA2	Q9UJY4	613 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TMEM120B	A0PK00	339 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	WDR91	A4D1P6	747 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GFPT2	O94808	682 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PTK2	Q05397	1052 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	KLC1	Q07866	573 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CUL3	Q13618	768 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	BLMH	Q13867	455 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SLC18A3	Q16572	532 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	FGD4	Q96M96	766 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SUGT1	Q9Y2Z0	365 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MAP3K15	Q6ZN16	1313 aa		11.51	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	OR52Z1	P0C646	297 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	FER	P16591	822 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TNNI2	P48788	182 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ARHGAP44	Q17R89	818 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ISLR2	Q6UXK2	745 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TGS1	Q96RS0	853 aa	Known RBP	11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PAGR1	Q9BTK6	254 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ASIC3	Q9UHC3	531 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SIK3	Q9Y2K2	1263 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RTCB	Q9Y3I0	505 aa	Known RBP	11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ENTPD5	O75356	428 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SLMAP	Q14BN4	828 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GJB7	Q6PEY0	223 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MAGEC3	Q8TD91	643 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	EZH1	Q92800	747 aa	Predicted RBP	11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ABTB1	Q969K4	478 aa	Predicted RBP	11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CTNNAL1	Q9UBT7	734 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SCOC	Q9UIL1	159 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RASAL2	Q9UJF2	1139 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ANKRD62	A6NC57	917 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CYP27B1	O15528	508 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TLR2	O60603	784 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SPAG7	O75391	227 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RARA	P10276	462 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SLC9A1	P19634	815 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GJC1	P36383	396 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ZBTB16	Q05516	673 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	KCNMA1	Q12791	1236 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CALCOCO2	Q13137	446 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SEPT7	Q16181	437 aa	Known RBP	11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	BICDL1	Q6ZP65	573 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	BARGIN	Q6ZT62	677 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MYOCD	Q8IZQ8	938 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TTC8	Q8TAM2	541 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PBK	Q96KB5	322 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CYTH2	Q99418	400 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PCDHB13	Q9Y5F0	798 aa		11.5	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MYMK	A6NI61	221 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597		H0YGN5	161 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SNX3	O60493	162 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	BAG2	O95816	211 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ETS2	P15036	469 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	BRAF	P15056	766 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TNFRSF8	P28908	595 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GYG1	P46976	350 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	DNAJC9	Q8WXX5	260 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	BAP1	Q92560	729 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PITPNM3	Q9BZ71	974 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	OSGEP	Q9NPF4	335 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	COL4A3BP	Q9Y5P4	624 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms