RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 VPS11Q9H270 941 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 SPON1Q9HCB6 807 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 ARFGAP3Q9NP61 516 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 CABP5Q9NP86 173 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 SH2B1Q9NRF2 756 aaPredicted RBP2.27□□□□□ -2.05
UBR4-217ENST00000497018 ANKEF1Q9NU02 776 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 TOR4AQ9NXH8 423 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 GGA3Q9NZ52 723 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 ARHGAP28Q9P2N2 729 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 PPARGC1AQ9UBK2 798 aaKnown RBP2.27□□□□□ -2.05
UBR4-217ENST00000497018 GRHPRQ9UBQ7 328 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 ZKSCAN5Q9Y2L8 839 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 FHOD1Q9Y613 1164 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 SPHKAPQ2M3C7 1700 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 MROH2AA6NES4 1674 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 DLC1Q96QB1 1528 aa2.27□□□□□ -2.05
UBR4-217ENST00000497018 C9orf84Q5VXU9 1444 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 CARMIL2Q6F5E8 1435 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 BRWD3Q6RI45 1802 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 TNIKQ9UKE5 1360 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 SOS2Q07890 1332 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 ERBB4Q15303 1308 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 SYNGAP1Q96PV0 1343 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PTPDC1A2A3K4 754 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 LCHNA4D1U4 455 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 SPDYE3A6NKU9 549 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 TOR1BO14657 336 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 KPNA5O15131 536 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 FANCGO15287 622 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 FRS3O43559 492 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 GDF9O60383 454 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 MAN1A2O60476 641 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PLOD3O60568 738 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 MAFKO60675 156 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 GFPT2O94808 682 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 DDX58O95786 925 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 TBX18O95935 607 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 CST3P01034 146 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 CSTBP04080 98 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 APPP05067 770 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ALDH2P05091 517 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 NEFMP07197 916 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 THBDP07204 575 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 DHRS4L1P0CG22 281 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 EIF2AK2P19525 551 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 CD33P20138 364 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 XPAP23025 273 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 GRK2P25098 689 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 POLD1P28340 1107 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 HOXC13P31276 330 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 HOXD12P35452 270 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ECI1P42126 302 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 LIFRP42702 1097 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 CABP4P57796 275 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ICA1Q05084 483 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ZNF543Q08ER8 600 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 G3BP1Q13283 466 aaKnown RBP eCLIP2.26□□□□□ -2.05
UBR4-217ENST00000497018 AUHQ13825 339 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 CNGB1Q14028 1251 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 SLBPQ14493 270 aaKnown RBP eCLIP2.26□□□□□ -2.05
UBR4-217ENST00000497018 SNX17Q15036 470 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 POLD3Q15054 466 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 POU4F3Q15319 338 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 CNN3Q15417 329 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 TAF11Q15544 211 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ANO6Q4KMQ2 910 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PKDCCQ504Y2 493 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PPM1JQ5JR12 505 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 HP1BP3Q5SSJ5 553 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 RNF220Q5VTB9 566 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 DARS2Q6PI48 645 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 APOA5Q6Q788 366 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 LBX2Q6XYB7 198 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 NEK10Q6ZWH5 1172 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 USP45Q70EL2 814 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ARMCX6Q7L4S7 300 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 KCNK18Q7Z418 384 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ADAT2Q7Z6V5 191 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 MTDHQ86UE4 582 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 ZSCAN30Q86W11 494 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 SIAH1Q8IUQ4 282 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ANKRD18AQ8IVF6 992 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 CCDC103Q8IW40 242 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PPIL6Q8IXY8 311 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 GRAMD1CQ8IYS0 662 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 DNAJC5GQ8N7S2 189 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PCYOX1LQ8NBM8 494 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 KCT2Q8NC54 265 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 SLC17A8Q8NDX2 589 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 DNAJB8Q8NHS0 232 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 FRS2Q8WU20 508 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 TRAPPC12Q8WVT3 735 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 LRTOMTQ8WZ04 291 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 HPS1Q92902 700 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PHKBQ93100 1093 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ARL8AQ96BM9 186 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 C1GALT1C1Q96EU7 318 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 TMEM41AQ96HV5 264 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PAWRQ96IZ0 340 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 DPH2Q9BQC3 489 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms