RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 M0QZ92 97 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 M0R2N6 131 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 HBP1O60381 514 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 XBP1P17861 261 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 NPY5RQ15761 445 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 IER5Q5VY09 327 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 PDXDC2PQ6P474 469 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 MOXD1Q6UVY6 613 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 TSHZ1Q6ZSZ6 1077 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 TMCO2Q7Z6W1 182 aaPredicted RBP17.81■□□□□ 0.44
HDAC4-213ENST00000496347 MYOCDQ8IZQ8 938 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 USP38Q8NB14 1042 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 DNAJB3Q8WWF6 145 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 RIT2Q99578 217 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 INSL6Q9Y581 213 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 TTC3P53804 2025 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 EVPLQ92817 2033 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 BRWD1Q9NSI6 2320 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 LCHNA4D1U4 455 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 ARHGEF15O94989 841 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 PSAPP07602 524 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 GHRP10912 638 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 POU3F3P20264 500 aaPredicted RBP17.8■□□□□ 0.44
HDAC4-213ENST00000496347 IGFBP4P22692 258 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 AK2P54819 239 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 FBXO47Q5MNV8 452 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
HDAC4-213ENST00000496347 KRT25Q7Z3Z0 450 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 TBCKQ8TEA7 893 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 FAM167AQ96KS9 214 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 FAM49AQ9H0Q0 323 aaPredicted RBP17.8■□□□□ 0.44
HDAC4-213ENST00000496347 PCDHA10Q9Y5I2 948 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 MAFBQ9Y5Q3 323 aaPredicted RBP17.8■□□□□ 0.44
HDAC4-213ENST00000496347 CDY2AQ9Y6F7 541 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 SQORQ9Y6N5 450 aa17.8■□□□□ 0.44
HDAC4-213ENST00000496347 KDM3AQ9Y4C1 1321 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 SMIM35A0A1B0GVV1 85 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 MSH4O15457 936 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 GTPBP6O43824 516 aaPredicted RBP17.79■□□□□ 0.44
HDAC4-213ENST00000496347 GAS7O60861 476 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 HTRA4P83105 476 aaPredicted RBP17.79■□□□□ 0.44
HDAC4-213ENST00000496347 LPIN1Q14693 890 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 NONOQ15233 471 aaKnown RBP eCLIP17.79■□□□□ 0.44
HDAC4-213ENST00000496347 Q4G0T1 1027 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 MTHFD1LQ6UB35 978 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 FAM43BQ6ZT52 329 aaPredicted RBP17.79■□□□□ 0.44
HDAC4-213ENST00000496347 SP7Q8TDD2 431 aaPredicted RBP17.79■□□□□ 0.44
HDAC4-213ENST00000496347 TRAPPC12Q8WVT3 735 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 BBXQ8WY36 941 aaPredicted RBP17.79■□□□□ 0.44
HDAC4-213ENST00000496347 ARNTL2Q8WYA1 636 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 WASF1Q92558 559 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 SLC5A5Q92911 643 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 GTF3C6Q969F1 213 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 AIFM3Q96NN9 605 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 PHF20Q9BVI0 1012 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 CEP131Q9UPN4 1083 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 TRPV2Q9Y5S1 764 aa17.79■□□□□ 0.44
HDAC4-213ENST00000496347 CYP3A7-CYP3A51PA0A087WV96 503 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.78■□□□□ 0.44
HDAC4-213ENST00000496347 LINC01553A4QN01 128 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 EPOPA6NHQ4 379 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 CYP3A7P24462 503 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 SFNP31947 248 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 JAK3P52333 1124 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 ZNF484Q5JVG2 852 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 LRCH2Q5VUJ6 765 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 SWSAP1Q6NVH7 229 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 CKAP2LQ8IYA6 745 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 NME8Q8N427 588 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 RDM1Q8NG50 284 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 TGS1Q96RS0 853 aaKnown RBP17.78■□□□□ 0.44
HDAC4-213ENST00000496347 OSBPL7Q9BZF2 842 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 SAMM50Q9Y512 469 aa17.78■□□□□ 0.44
HDAC4-213ENST00000496347 ZBTB42B2RXF5 422 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 EDIL3O43854 480 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 ERVK-21P61565 698 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 FAM117BQ6P1L5 589 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 TOP1MTQ969P6 601 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 ZBTB10Q96DT7 871 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 MBOAT7Q96N66 472 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 YME1L1Q96TA2 773 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 TEKT3Q9BXF9 490 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 FTHL17Q9BXU8 183 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 CERS4Q9HA82 394 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 DISC1Q9NRI5 854 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 THEGQ9P2T0 379 aa17.77■□□□□ 0.44
HDAC4-213ENST00000496347 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 DLL1O00548 723 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 TDP2O95551 362 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 C22orf31O95567 290 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 GCFC2P16383 781 aaKnown RBP17.76■□□□□ 0.43
HDAC4-213ENST00000496347 KLRC1P26715 233 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 ETNPPLQ8TBG4 499 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 UIMC1Q96RL1 719 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 ORC3Q9UBD5 711 aaPredicted RBP17.76■□□□□ 0.43
HDAC4-213ENST00000496347 GABBR1Q9UBS5 961 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 KCNJ14Q9UNX9 436 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 MTCH2Q9Y6C9 303 aa17.76■□□□□ 0.43
HDAC4-213ENST00000496347 PSMD10O75832 226 aa17.75■□□□□ 0.43
HDAC4-213ENST00000496347 CTDNEP1O95476 244 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms