RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SLC9A2Q9UBY0 812 aa20.1■□□□□ 0.81
TMEM53-209ENST00000495630 IGSF9BQ9UPX0 1349 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 KDM3AQ9Y4C1 1321 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 CCDC69A6NI79 296 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 LOC730098B7Z3J9 87 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 CSPG5O95196 566 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 SCG2P13521 617 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 PAK2Q13177 524 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 NFXL1Q6ZNB6 911 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 ADGRD2Q7Z7M1 963 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 ZBTB10Q96DT7 871 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 RNF216Q9NWF9 866 aaPredicted RBP20.09■□□□□ 0.81
TMEM53-209ENST00000495630 TRPC6Q9Y210 931 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 DOCK5Q9H7D0 1870 aa20.09■□□□□ 0.81
TMEM53-209ENST00000495630 SMIM35A0A1B0GVV1 85 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 PRC1O43663 620 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 MCM5P33992 734 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 LIFRP42702 1097 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 NRIP1P48552 1158 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 STAT5BP51692 787 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 KRT76Q01546 638 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 UBE3AQ05086 875 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 PLCB4Q15147 1175 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 UBE2SQ16763 222 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 PAN2Q504Q3 1202 aaKnown RBP20.08■□□□□ 0.81
TMEM53-209ENST00000495630 TRIM67Q6ZTA4 783 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 CMTR1Q8N1G2 835 aaKnown RBP20.08■□□□□ 0.81
TMEM53-209ENST00000495630 PRRX2Q99811 253 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 MXRA8Q9BRK3 442 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 KCNH7Q9NS40 1196 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 LRFN2Q9ULH4 789 aa20.08■□□□□ 0.81
TMEM53-209ENST00000495630 C5orf42Q9H799 3197 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 NFASCO94856 1347 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 SARSP49591 514 aaKnown RBP20.07■□□□□ 0.8
TMEM53-209ENST00000495630 SLC26A2P50443 739 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 TMEM62Q0P6H9 643 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 CBX2Q14781 532 aaPredicted RBP20.07■□□□□ 0.8
TMEM53-209ENST00000495630 RBM23Q86U06 439 aaKnown RBP20.07■□□□□ 0.8
TMEM53-209ENST00000495630 TEX2Q8IWB9 1127 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 PBXIP1Q96AQ6 731 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 SDF4Q9BRK5 362 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 TLE6Q9H808 572 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 PCDHB7Q9Y5E2 793 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 PCDHB12Q9Y5F1 795 aa20.07■□□□□ 0.8
TMEM53-209ENST00000495630 RBM8AQ9Y5S9 174 aaKnown RBP20.07■□□□□ 0.8
TMEM53-209ENST00000495630 WDFY4Q6ZS81 3184 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 TMEM221A6NGB7 291 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 M0R296 226 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 SH2B2O14492 632 aaPredicted RBP20.06■□□□□ 0.8
TMEM53-209ENST00000495630 ATG7O95352 703 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 ACTR2P61160 394 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 ZXDAP98168 799 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 MTHFD1LQ6UB35 978 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 FANCBQ8NB91 859 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 MICAL1Q8TDZ2 1067 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 TRAPPC12Q8WVT3 735 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 PHF7Q9BWX1 381 aaPredicted RBP20.06■□□□□ 0.8
TMEM53-209ENST00000495630 TMX1Q9H3N1 280 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 AAASQ9NRG9 546 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 TRIOO75962 3097 aa20.06■□□□□ 0.8
TMEM53-209ENST00000495630 ZNF318Q5VUA4 2279 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 FSD2A1L4K1 749 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 PPFIA3O75145 1194 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 GLP2RO95838 553 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 KLRC1P26715 233 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 NFX1Q12986 1120 aaKnown RBP20.05■□□□□ 0.8
TMEM53-209ENST00000495630 ODR4Q5SWX8 454 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 PDE12Q6L8Q7 609 aaKnown RBP20.05■□□□□ 0.8
TMEM53-209ENST00000495630 CCDC82Q8N4S0 544 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 CYP2W1Q8TAV3 490 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 USP15Q9Y4E8 981 aaPredicted RBP20.05■□□□□ 0.8
TMEM53-209ENST00000495630 SLC12A7Q9Y666 1083 aa20.05■□□□□ 0.8
TMEM53-209ENST00000495630 TECTAO75443 2155 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 hCG_1642624A0A1W2PR95 340 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 FOSP01100 380 aaPredicted RBP20.04■□□□□ 0.8
TMEM53-209ENST00000495630 ARP10275 920 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 RXRAP19793 462 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 GATMP50440 423 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 HEATR3Q7Z4Q2 680 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 ATP8B4Q8TF62 1192 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 CDCA3Q99618 268 aaPredicted RBP20.04■□□□□ 0.8
TMEM53-209ENST00000495630 ERVK-5Q9HDB9 667 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 RGS18Q9NS28 235 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 C1orf112Q9NSG2 853 aa20.04■□□□□ 0.8
TMEM53-209ENST00000495630 BARX2Q9UMQ3 279 aaPredicted RBP20.04■□□□□ 0.8
TMEM53-209ENST00000495630 IGKV6D-21A0A0A0MT36 114 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 HBP1O60381 514 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 ATF7P17544 494 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-209ENST00000495630 PTPN5P54829 565 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 TMEM266Q2M3C6 531 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 CEP55Q53EZ4 464 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 SPOUT1Q5T280 376 aaKnown RBP20.03■□□□□ 0.8
TMEM53-209ENST00000495630 IER5LQ5T953 404 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 TMTC3Q6ZXV5 915 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 SLC24A5Q71RS6 500 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 SUGP1Q8IWZ8 645 aaKnown RBP20.03■□□□□ 0.8
TMEM53-209ENST00000495630 AGO4Q9HCK5 861 aaKnown RBP20.03■□□□□ 0.8
TMEM53-209ENST00000495630 TLR9Q9NR96 1032 aa20.03■□□□□ 0.8
TMEM53-209ENST00000495630 MEIS1O00470 390 aa20.02■□□□□ 0.8
TMEM53-209ENST00000495630 PER2O15055 1255 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms