RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 CNNM2Q9H8M5 875 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 GCM1Q9NP62 436 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 SIRPGQ9P1W8 387 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 DUSP13Q9UII6 198 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 MSRB2Q9Y3D2 182 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 MYH3P11055 1940 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 CASZ1Q86V15 1759 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 CARMIL3Q8ND23 1372 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 ABCC12Q96J65 1359 aa6.79□□□□□ -1.32
GAPVD1-218ENST00000495588 KDM2BQ8NHM5 1336 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 TNRC6CQ9HCJ0 1690 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 SLC22A31A6NKX4 558 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 WASH4PA8MWX3 477 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 POLRMTO00411 1230 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 PDE8AO60658 829 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 SERPINB2P05120 415 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 ETV3P41162 512 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 EGR3Q06889 387 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 MTX1Q13505 466 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 HDAC1Q13547 482 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 SSPNQ14714 243 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 RABL6Q3YEC7 729 aaPredicted RBP6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 TIGD5Q53EQ6 642 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 MCATQ8IVS2 390 aaKnown RBP6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 NLGN1Q8N2Q7 840 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 PLA2G12BQ9BX93 195 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 TMPRSS5Q9H3S3 457 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 ANTXR1Q9H6X2 564 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 GPATCH2Q9NW75 528 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 HDAC5Q9UQL6 1122 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 NRXN2Q9P2S2 1712 aa6.78□□□□□ -1.32
GAPVD1-218ENST00000495588 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 SRGAP3O43295 1099 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 PGRP06401 933 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 MMP10P09238 476 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 GUCY2CP25092 1073 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 R3HDM1Q15032 1099 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 GAB4Q2WGN9 574 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 OVOS1Q6IE37 1185 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 PRR5LQ6MZQ0 368 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 LMBR1LQ6UX01 489 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 SPPL2CQ8IUH8 684 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 CNBD1Q8NA66 436 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 TTLL11Q8NHH1 800 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 KLHDC4Q8TBB5 520 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 SSH3Q8TE77 659 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 HNRNPLLQ8WVV9 542 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 ATG4CQ96DT6 458 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 NYXQ9GZU5 481 aa6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 DUSP15Q9H1R2 295 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 RWDD1Q9H446 243 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-218ENST00000495588 NPHP1O15259 732 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 HMMRO75330 724 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 CSF1RP07333 972 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 ACRP10323 421 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 NME1P15531 152 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 PI3P19957 117 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 CCNFP41002 786 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 RFX5P48382 616 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 SNX17Q15036 470 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 SLC10A5Q5PT55 438 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 FBXW10Q5XX13 1052 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 SLC6A19Q695T7 634 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 CENPQQ7L2Z9 268 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 NLRC3Q7RTR2 1065 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 PIF1Q9H611 641 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 ACTR10Q9NZ32 417 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 TJP2Q9UDY2 1190 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 GPR160Q9UJ42 338 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 PA2G4Q9UQ80 394 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 IRAK3Q9Y616 596 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 COL4A1P02462 1669 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 ANKRD31Q8N7Z5 1873 aa6.76□□□□□ -1.33
GAPVD1-218ENST00000495588 A0A1W2PQH9 124 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 ZBTB7AO95365 584 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 AFF3P51826 1226 aaKnown RBP6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 ST5P78524 1137 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 CHRNEQ04844 493 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 RASA3Q14644 834 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 GIMAP6Q6P9H5 292 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 SKAP1Q86WV1 359 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 SMC5Q8IY18 1101 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 TMEM87BQ96K49 555 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 SIGLEC10Q96LC7 697 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 GREM2Q9H772 168 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 DCTPP1Q9H773 170 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 EXOC6BQ9Y2D4 811 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 SLC12A7Q9Y666 1083 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 RIC1Q4ADV7 1423 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 TAF1P21675 1872 aa6.75□□□□□ -1.33
GAPVD1-218ENST00000495588 SPEF2Q9C093 1822 aa6.74□□□□□ -1.33
GAPVD1-218ENST00000495588 SURF6O75683 361 aaKnown RBP6.74□□□□□ -1.33
GAPVD1-218ENST00000495588 HSP90B1P14625 803 aaKnown RBP6.74□□□□□ -1.33
GAPVD1-218ENST00000495588 YARSP54577 528 aaKnown RBP6.74□□□□□ -1.33
GAPVD1-218ENST00000495588 IFIT5Q13325 482 aaKnown RBP6.74□□□□□ -1.33
GAPVD1-218ENST00000495588 SF3B3Q15393 1217 aaKnown RBP6.74□□□□□ -1.33
GAPVD1-218ENST00000495588 DDR2Q16832 855 aa6.74□□□□□ -1.33
GAPVD1-218ENST00000495588 CCDC57Q2TAC2 916 aa6.74□□□□□ -1.33
GAPVD1-218ENST00000495588 CCDC152Q4G0S7 254 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms